BLASTX nr result

ID: Cnidium21_contig00029016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029016
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26088.3| unnamed protein product [Vitis vinifera]               63   3e-08
emb|CBI36806.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002330359.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
ref|XP_002276298.2| PREDICTED: protein ALWAYS EARLY 3-like [Viti...    55   8e-06

>emb|CBI26088.3| unnamed protein product [Vitis vinifera]
          Length = 1127

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 55/127 (43%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
 Frame = -3

Query: 360 GTASQNGKRRYGNKAEAYN-GKNHLVEIREACSGT--GQLLDA--GDISGAEVTDAKF-X 199
           G + Q GK+ YG KAE  + G NHL +I+EACSGT  GQ L A  G +   EV DAK   
Sbjct: 241 GGSPQKGKKFYGKKAEVEDSGNNHLDDIKEACSGTEEGQKLSAVRGRLE-TEVVDAKIVR 299

Query: 198 XXXXXXXXXXXKVLFVRDKGSDLHPLEFLADCSL-MPETANDNGPSVQLKEER-NYADMS 25
                      KVLF  D+G+    L+ LAD SL MP T  D   SV +K E  +  D S
Sbjct: 300 SSSQGTRKRSKKVLFGGDEGTAFDALQTLADLSLMMPATNIDTESSVPVKGENIDIVDES 359

Query: 24  EFLKAMP 4
           + L  MP
Sbjct: 360 KTLDVMP 366


>emb|CBI36806.3| unnamed protein product [Vitis vinifera]
          Length = 1151

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
 Frame = -3

Query: 438 GSNQGAEADDGDFPRTNSSRMRDGNIGTAS-QNGKRRYGNKAEAYNGKNHLVEIREACSG 262
           G+ +   A++GD+     S M    +GT   Q GK+   N+     G N   + REACS 
Sbjct: 279 GNLESRGAENGDYAGDTCSLMDSECVGTVVLQEGKKFCDNEKVEEIGNNQFDDCREACSD 338

Query: 261 TG--QLLDAGDISGAEVTDAKFXXXXXXXXXXXXKVLFVRDKGSDLHPLEFLADCSL-MP 91
           T    +         EVT+AK             K LF  D+ S L  L+ LAD SL MP
Sbjct: 339 TEGHNMNPVKRKIDTEVTNAKIEPSSPCGQRKRSKKLFFGDESSALDALQTLADLSLMMP 398

Query: 90  ETANDNGPSVQLKEER 43
           ++A ++  S+QLKEE+
Sbjct: 399 DSAVESESSIQLKEEK 414


>ref|XP_002330359.1| predicted protein [Populus trichocarpa] gi|222871563|gb|EEF08694.1|
           predicted protein [Populus trichocarpa]
          Length = 980

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
 Frame = -3

Query: 342 GKRRYGNKAEAYNGKNHLVEIREACSGT--GQLLDA-GDISGAEVTDAKFXXXXXXXXXX 172
           GKR YG +  A +  ++L ++REACSGT  GQ LDA  ++   EV D K           
Sbjct: 148 GKRYYGRRPPAEDLDDNLDDVREACSGTEEGQKLDAVEELFEMEVADTKLVRSSKGSRK- 206

Query: 171 XXKVLFVRDKGSDLHPLEFLADCSL-MPETANDNGPSVQLKEERNYADMSEFLKAMP 4
                  R + +D   LE LAD SL +PET  D G SV ++EE+        LK  P
Sbjct: 207 -------RIEDADFDALEALADLSLRLPETPVDTGSSVYVEEEKTGIVAKSKLKGNP 256


>ref|XP_002276298.2| PREDICTED: protein ALWAYS EARLY 3-like [Vitis vinifera]
          Length = 1146

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 46/100 (46%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
 Frame = -3

Query: 348 QNGKRRYGNKAEAYN-GKNHLVEIREACSGT--GQLLDA--GDISGAEVTDAKF-XXXXX 187
           Q GK+ YG KAE  + G NHL +I+EACSGT  GQ L A  G +   EV DAK       
Sbjct: 254 QKGKKFYGKKAEVEDSGNNHLDDIKEACSGTEEGQKLSAVRGRLE-TEVVDAKIVRSSSQ 312

Query: 186 XXXXXXXKVLFVRDKGSDLHPLEFLADCSL-MPETANDNG 70
                  KVLF  D+G+    L+ LAD SL MP T  D G
Sbjct: 313 GTRKRSKKVLFGGDEGTAFDALQTLADLSLMMPATNIDTG 352


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