BLASTX nr result

ID: Cnidium21_contig00029007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029007
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42252.1| unknown [Lotus japonicus]                              171   2e-40
ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like [Gly...   167   3e-39
ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Gly...   164   3e-38
emb|CBI31833.3| unnamed protein product [Vitis vinifera]              152   1e-34
ref|XP_002279638.1| PREDICTED: F-box protein At4g00755-like [Vit...   152   1e-34

>gb|AFK42252.1| unknown [Lotus japonicus]
          Length = 304

 Score =  171 bits (434), Expect = 2e-40
 Identities = 81/128 (63%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   FVWTYTSPEFPMVQENCLQKFTLPEPAICIGGILLVELLGRVQRQEMDGLYYICIAHVQV 182
           F+WTYTSPEFPM QEN LQKF LP+P + IGG+LLVELLGRVQ+QEMD L+YICI+HVQV
Sbjct: 168 FIWTYTSPEFPMFQENRLQKFKLPDPVLSIGGVLLVELLGRVQKQEMDELFYICISHVQV 227

Query: 183 VGRPLSPTFDVEILDSSGKCNLKYYPEASYCWSPTKSGEACMNNPSRFR-MFTASIRGWE 359
           VG+PLSP FD++I   SGKC LKY+P+  +C   T S     NNPSR R +  + +R WE
Sbjct: 228 VGQPLSPAFDIKIHHPSGKCTLKYFPQTDWCVPSTSSPTIESNNPSRLRSLMQSGVRRWE 287

Query: 360 QMILNTLL 383
           Q+IL  LL
Sbjct: 288 QIILGALL 295


>ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 372

 Score =  167 bits (423), Expect = 3e-39
 Identities = 85/133 (63%), Positives = 99/133 (74%), Gaps = 6/133 (4%)
 Frame = +3

Query: 3   FVWTYTSPEFPMVQENCLQKFTLPEPAICIGGILLVELLGRVQRQEMDGLYYICIAHVQV 182
           F+WTYTSPEFPM+QEN LQKF LPEP +CIGG+LLVELLGRVQ+QEMD L+YICI+HVQV
Sbjct: 228 FIWTYTSPEFPMLQENRLQKFKLPEPVLCIGGVLLVELLGRVQKQEMDELFYICISHVQV 287

Query: 183 VGRPLSPTFDVEILDSSGKCNLKYYPEAS-YCWSPTKSGEACMNNPSRFRMFTASI---- 347
           +GR L P FDV+I   SGKC LKY P+   Y  SPT S  +  +NPSR R  T+SI    
Sbjct: 288 MGRLLFPEFDVKIHHWSGKCTLKYCPQTDCYMSSPTSSPRSNSSNPSRLRTITSSIMQRG 347

Query: 348 -RGWEQMILNTLL 383
            R WEQ +L  LL
Sbjct: 348 VRRWEQFLLGALL 360


>ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 374

 Score =  164 bits (414), Expect = 3e-38
 Identities = 82/133 (61%), Positives = 98/133 (73%), Gaps = 6/133 (4%)
 Frame = +3

Query: 3   FVWTYTSPEFPMVQENCLQKFTLPEPAICIGGILLVELLGRVQRQEMDGLYYICIAHVQV 182
           F+WTYTSPEFPM QEN LQKF LPEP +CIGG+LLVELLGRVQ+QEMD L+YICI+HVQ 
Sbjct: 228 FIWTYTSPEFPMFQENRLQKFKLPEPVLCIGGVLLVELLGRVQKQEMDELFYICISHVQA 287

Query: 183 VGRPLSPTFDVEILDSSGKCNLKYYPEAS-YCWSPTKSGEACMNNPSRFRMFTASI---- 347
           +GR +SP FDV+I   SGKC LKY P+   Y  S T S  +  +NPSR R  T++I    
Sbjct: 288 MGRSISPEFDVKIHHPSGKCTLKYCPQIDCYVSSSTSSQRSDSSNPSRLRTITSNIMQRG 347

Query: 348 -RGWEQMILNTLL 383
            R WEQ +L+ LL
Sbjct: 348 VRRWEQFLLSALL 360


>emb|CBI31833.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  152 bits (384), Expect = 1e-34
 Identities = 71/99 (71%), Positives = 80/99 (80%)
 Frame = +3

Query: 3   FVWTYTSPEFPMVQENCLQKFTLPEPAICIGGILLVELLGRVQRQEMDGLYYICIAHVQV 182
           ++WTYTSPEFPM QEN LQKF LPEPA+CIGGIL +ELLGRVQ+QEMDGLYYIC++HVQV
Sbjct: 206 YIWTYTSPEFPMAQENRLQKFKLPEPALCIGGILQIELLGRVQKQEMDGLYYICVSHVQV 265

Query: 183 VGRPLSPTFDVEILDSSGKCNLKYYPEASYCWSPTKSGE 299
           VGRPLS  FDVEI D SGK  LKY+     C SP  + E
Sbjct: 266 VGRPLSEAFDVEIHDPSGKFTLKYFHRGYQCQSPVVAPE 304


>ref|XP_002279638.1| PREDICTED: F-box protein At4g00755-like [Vitis vinifera]
          Length = 368

 Score =  152 bits (384), Expect = 1e-34
 Identities = 71/99 (71%), Positives = 80/99 (80%)
 Frame = +3

Query: 3   FVWTYTSPEFPMVQENCLQKFTLPEPAICIGGILLVELLGRVQRQEMDGLYYICIAHVQV 182
           ++WTYTSPEFPM QEN LQKF LPEPA+CIGGIL +ELLGRVQ+QEMDGLYYIC++HVQV
Sbjct: 229 YIWTYTSPEFPMAQENRLQKFKLPEPALCIGGILQIELLGRVQKQEMDGLYYICVSHVQV 288

Query: 183 VGRPLSPTFDVEILDSSGKCNLKYYPEASYCWSPTKSGE 299
           VGRPLS  FDVEI D SGK  LKY+     C SP  + E
Sbjct: 289 VGRPLSEAFDVEIHDPSGKFTLKYFHRGYQCQSPVVAPE 327


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