BLASTX nr result

ID: Cnidium21_contig00029000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029000
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314544.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
gb|ACD56609.1| putative integral membrane protein [Gossypioides ...   147   7e-34
gb|ABO41839.1| putative integral membrane protein [Gossypium arb...   147   7e-34
gb|ABO41833.1| putative integral membrane protein [Gossypium rai...   147   7e-34
ref|XP_002311722.1| predicted protein [Populus trichocarpa] gi|2...   147   9e-34

>ref|XP_002314544.1| predicted protein [Populus trichocarpa] gi|222863584|gb|EEF00715.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  149 bits (375), Expect = 3e-34
 Identities = 74/101 (73%), Positives = 78/101 (77%)
 Frame = -3

Query: 304 GGSVLYVMTDYQFTLMAYSWALAYLISMSIDFVYIKHVVMTIGLNTWGXXXXXXXXXXXX 125
           GGSVLYV+TDYQFT+MAYSWALAYL+SM+IDFVYIKHVVMTIGLNTWG            
Sbjct: 168 GGSVLYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVVYNNLEALLL 227

Query: 124 XXXXXXXXXXLKKIKHEISDESDWHSFQVVLPVGLSCLFGL 2
                     LKKIKHEISDESDWHSF VVLPVGLSCLFGL
Sbjct: 228 FPLELLIMGELKKIKHEISDESDWHSFAVVLPVGLSCLFGL 268


>gb|ACD56609.1| putative integral membrane protein [Gossypioides kirkii]
          Length = 371

 Score =  147 bits (372), Expect = 7e-34
 Identities = 73/101 (72%), Positives = 77/101 (76%)
 Frame = -3

Query: 304 GGSVLYVMTDYQFTLMAYSWALAYLISMSIDFVYIKHVVMTIGLNTWGXXXXXXXXXXXX 125
           GGSVLYV+TDYQFTL AY+WA AYL+SMSIDFVYIKHVVMTIGLNTWG            
Sbjct: 164 GGSVLYVLTDYQFTLTAYTWAAAYLVSMSIDFVYIKHVVMTIGLNTWGLVLYNNLEALLL 223

Query: 124 XXXXXXXXXXLKKIKHEISDESDWHSFQVVLPVGLSCLFGL 2
                     LKKIKHEISDESDWHSFQV+LPVGLSCLFGL
Sbjct: 224 FPLELLIMGELKKIKHEISDESDWHSFQVILPVGLSCLFGL 264


>gb|ABO41839.1| putative integral membrane protein [Gossypium arboreum]
           gi|133902315|gb|ABO41844.1| putative integral membrane
           protein [Gossypium hirsutum]
          Length = 369

 Score =  147 bits (372), Expect = 7e-34
 Identities = 73/101 (72%), Positives = 77/101 (76%)
 Frame = -3

Query: 304 GGSVLYVMTDYQFTLMAYSWALAYLISMSIDFVYIKHVVMTIGLNTWGXXXXXXXXXXXX 125
           GGSVLYV+TDYQFTL AY+WA AYL+SMSIDFVYIKHVVMTIGLNTWG            
Sbjct: 164 GGSVLYVLTDYQFTLTAYTWAAAYLVSMSIDFVYIKHVVMTIGLNTWGLVLYNNLEALLL 223

Query: 124 XXXXXXXXXXLKKIKHEISDESDWHSFQVVLPVGLSCLFGL 2
                     LKKIKHEISDESDWHSFQV+LPVGLSCLFGL
Sbjct: 224 FPLELLIMGELKKIKHEISDESDWHSFQVILPVGLSCLFGL 264


>gb|ABO41833.1| putative integral membrane protein [Gossypium raimondii]
          Length = 369

 Score =  147 bits (372), Expect = 7e-34
 Identities = 73/101 (72%), Positives = 77/101 (76%)
 Frame = -3

Query: 304 GGSVLYVMTDYQFTLMAYSWALAYLISMSIDFVYIKHVVMTIGLNTWGXXXXXXXXXXXX 125
           GGSVLYV+TDYQFTL AY+WA AYL+SMSIDFVYIKHVVMTIGLNTWG            
Sbjct: 164 GGSVLYVLTDYQFTLTAYTWAAAYLVSMSIDFVYIKHVVMTIGLNTWGLVLYNNLEALLL 223

Query: 124 XXXXXXXXXXLKKIKHEISDESDWHSFQVVLPVGLSCLFGL 2
                     LKKIKHEISDESDWHSFQV+LPVGLSCLFGL
Sbjct: 224 FPLELLIMGELKKIKHEISDESDWHSFQVILPVGLSCLFGL 264


>ref|XP_002311722.1| predicted protein [Populus trichocarpa] gi|222851542|gb|EEE89089.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/101 (72%), Positives = 78/101 (77%)
 Frame = -3

Query: 304 GGSVLYVMTDYQFTLMAYSWALAYLISMSIDFVYIKHVVMTIGLNTWGXXXXXXXXXXXX 125
           GGSVLYV+TDYQFT+MAYSWA+AYL+SM+IDFVYIKHVVMTIGLNTWG            
Sbjct: 141 GGSVLYVLTDYQFTVMAYSWAVAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLL 200

Query: 124 XXXXXXXXXXLKKIKHEISDESDWHSFQVVLPVGLSCLFGL 2
                     LKKIKHEISDESDWHSF VVLPVGLSCLFGL
Sbjct: 201 FPLELLIMGELKKIKHEISDESDWHSFGVVLPVGLSCLFGL 241


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