BLASTX nr result

ID: Cnidium21_contig00028977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028977
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAI94495.1| pectate lyase [Dianthus caryophyllus]                 159   3e-37
ref|XP_003608909.1| Pectate lyase [Medicago truncatula] gi|35550...   157   7e-37
gb|AAK25850.1|AF360140_1 putative pectate lyase [Arabidopsis tha...   157   1e-36
ref|NP_567707.1| putative pectate lyase 18 [Arabidopsis thaliana...   157   1e-36
emb|CAA22985.1| putative pectate lyase [Arabidopsis thaliana] gi...   157   1e-36

>dbj|BAI94495.1| pectate lyase [Dianthus caryophyllus]
          Length = 407

 Score =  159 bits (401), Expect = 3e-37
 Identities = 78/106 (73%), Positives = 82/106 (77%)
 Frame = -1

Query: 322 HWEMYAIGGSASPTINSQGNRFLAPDRRFSKEVTKHEDAPESEWKNWNWRSEGDLMLNGA 143
           HWEMYAIGGSASPTINSQGNRFLAP+ RF KEVTKHEDAPE EWKNWNWRSEGDLMLNGA
Sbjct: 303 HWEMYAIGGSASPTINSQGNRFLAPNDRFKKEVTKHEDAPEGEWKNWNWRSEGDLMLNGA 362

Query: 142 FFKPXXXXXXXXXXXXXXXXXARPSTLVGQLTSASGSLNCKKGSRC 5
           FF P                 ARPSTLVG LT ++GSL C+KGSRC
Sbjct: 363 FFTP-SGAGASSSYARASSLGARPSTLVGTLTGSAGSLVCRKGSRC 407


>ref|XP_003608909.1| Pectate lyase [Medicago truncatula] gi|355509964|gb|AES91106.1|
           Pectate lyase [Medicago truncatula]
          Length = 407

 Score =  157 bits (398), Expect = 7e-37
 Identities = 73/106 (68%), Positives = 81/106 (76%)
 Frame = -1

Query: 322 HWEMYAIGGSASPTINSQGNRFLAPDRRFSKEVTKHEDAPESEWKNWNWRSEGDLMLNGA 143
           HWEMYAIGGSA+PTINSQGNRF+APD RFSKEVTKHEDAPE EWK WNWRSEGDL++NGA
Sbjct: 302 HWEMYAIGGSANPTINSQGNRFVAPDDRFSKEVTKHEDAPEGEWKGWNWRSEGDLLINGA 361

Query: 142 FFKPXXXXXXXXXXXXXXXXXARPSTLVGQLTSASGSLNCKKGSRC 5
           FF P                 ARPS+LVG +T+ +G L CKKGSRC
Sbjct: 362 FFTPSGAGGASSSYARASSLSARPSSLVGTITTGAGVLGCKKGSRC 407


>gb|AAK25850.1|AF360140_1 putative pectate lyase [Arabidopsis thaliana]
          Length = 408

 Score =  157 bits (396), Expect = 1e-36
 Identities = 76/106 (71%), Positives = 83/106 (78%)
 Frame = -1

Query: 322 HWEMYAIGGSASPTINSQGNRFLAPDRRFSKEVTKHEDAPESEWKNWNWRSEGDLMLNGA 143
           HWEMYAIGGSA+PTINSQGNRFLAP+ RFSKEVTKHEDAPESEWK WNWRS GDL+LNGA
Sbjct: 304 HWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGA 363

Query: 142 FFKPXXXXXXXXXXXXXXXXXARPSTLVGQLTSASGSLNCKKGSRC 5
           FF P                 A+PS+LVG LTS SG+LNC+KGSRC
Sbjct: 364 FFTP-SGGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408


>ref|NP_567707.1| putative pectate lyase 18 [Arabidopsis thaliana]
           gi|334186896|ref|NP_001190827.1| putative pectate lyase
           18 [Arabidopsis thaliana]
           gi|32129908|sp|Q9C5M8.2|PEL18_ARATH RecName:
           Full=Probable pectate lyase 18; AltName: Full=Pectate
           lyase A10; Flags: Precursor gi|57222166|gb|AAW38990.1|
           At4g24780 [Arabidopsis thaliana]
           gi|332659555|gb|AEE84955.1| putative pectate lyase 18
           [Arabidopsis thaliana] gi|332659556|gb|AEE84956.1|
           putative pectate lyase 18 [Arabidopsis thaliana]
          Length = 408

 Score =  157 bits (396), Expect = 1e-36
 Identities = 76/106 (71%), Positives = 83/106 (78%)
 Frame = -1

Query: 322 HWEMYAIGGSASPTINSQGNRFLAPDRRFSKEVTKHEDAPESEWKNWNWRSEGDLMLNGA 143
           HWEMYAIGGSA+PTINSQGNRFLAP+ RFSKEVTKHEDAPESEWK WNWRS GDL+LNGA
Sbjct: 304 HWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGA 363

Query: 142 FFKPXXXXXXXXXXXXXXXXXARPSTLVGQLTSASGSLNCKKGSRC 5
           FF P                 A+PS+LVG LTS SG+LNC+KGSRC
Sbjct: 364 FFTP-SGGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408


>emb|CAA22985.1| putative pectate lyase [Arabidopsis thaliana]
           gi|7269329|emb|CAB79388.1| putative pectate lyase
           [Arabidopsis thaliana]
          Length = 404

 Score =  157 bits (396), Expect = 1e-36
 Identities = 76/106 (71%), Positives = 83/106 (78%)
 Frame = -1

Query: 322 HWEMYAIGGSASPTINSQGNRFLAPDRRFSKEVTKHEDAPESEWKNWNWRSEGDLMLNGA 143
           HWEMYAIGGSA+PTINSQGNRFLAP+ RFSKEVTKHEDAPESEWK WNWRS GDL+LNGA
Sbjct: 300 HWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGA 359

Query: 142 FFKPXXXXXXXXXXXXXXXXXARPSTLVGQLTSASGSLNCKKGSRC 5
           FF P                 A+PS+LVG LTS SG+LNC+KGSRC
Sbjct: 360 FFTP-SGGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 404


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