BLASTX nr result

ID: Cnidium21_contig00028938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028938
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284421.1| PREDICTED: uncharacterized protein LOC100244...    89   4e-16
emb|CAN80354.1| hypothetical protein VITISV_003142 [Vitis vinifera]    89   4e-16
ref|XP_002531117.1| conserved hypothetical protein [Ricinus comm...    83   3e-14
ref|XP_002309642.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002298377.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08

>ref|XP_002284421.1| PREDICTED: uncharacterized protein LOC100244942 [Vitis vinifera]
          Length = 317

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 53/111 (47%), Positives = 65/111 (58%)
 Frame = +3

Query: 3   RGQLRKLLNKLVPLNYTTPNTEFFTKTLPQLSPESPLVNPMLPILSTTESNSFSEPYNYH 182
           R QL+K+LNK++P      +   F    PQL PESPL+ P     S TESNS SE YN  
Sbjct: 64  RDQLQKILNKVMP-----SSPPEFLPLRPQLQPESPLIKPTKANSSITESNSLSETYNPQ 118

Query: 183 SQNSSPASSVFEPVTSTELSSPHAGVLSSKIGFVNQPFVQDYKGTSPTTLV 335
           S  S P  S F+ VTS +LS+      SS + FVNQPFVQ+Y G+ P  LV
Sbjct: 119 SHGSPPVDSFFDTVTSPDLSNITLAD-SSNMAFVNQPFVQEYNGSVPAGLV 168


>emb|CAN80354.1| hypothetical protein VITISV_003142 [Vitis vinifera]
          Length = 347

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 53/111 (47%), Positives = 65/111 (58%)
 Frame = +3

Query: 3   RGQLRKLLNKLVPLNYTTPNTEFFTKTLPQLSPESPLVNPMLPILSTTESNSFSEPYNYH 182
           R QL+K+LNK++P      +   F    PQL PESPL+ P     S TESNS SE YN  
Sbjct: 94  RDQLQKILNKVMP-----SSPPEFLPLRPQLQPESPLIKPTKANSSITESNSLSETYNPQ 148

Query: 183 SQNSSPASSVFEPVTSTELSSPHAGVLSSKIGFVNQPFVQDYKGTSPTTLV 335
           S  S P  S F+ VTS +LS+      SS + FVNQPFVQ+Y G+ P  LV
Sbjct: 149 SHGSPPVDSFFDTVTSPDLSNITLAD-SSNMAFVNQPFVQEYNGSVPAGLV 198


>ref|XP_002531117.1| conserved hypothetical protein [Ricinus communis]
           gi|223529313|gb|EEF31282.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 51/111 (45%), Positives = 66/111 (59%)
 Frame = +3

Query: 3   RGQLRKLLNKLVPLNYTTPNTEFFTKTLPQLSPESPLVNPMLPILSTTESNSFSEPYNYH 182
           + QL+KLL+KL+P +     T      +PQ  PESPLV PM    S TESNS S+ YN+ 
Sbjct: 64  KDQLQKLLSKLMPTS-----TYELHPIIPQAQPESPLVLPMKANSSITESNSLSDTYNHQ 118

Query: 183 SQNSSPASSVFEPVTSTELSSPHAGVLSSKIGFVNQPFVQDYKGTSPTTLV 335
           S  SSP  S F+ VTS + SS +    SS I  VN+ +VQ+Y G+  T LV
Sbjct: 119 SHGSSPVDSFFDAVTSPDFSSINMAD-SSCINLVNKTYVQEYSGSMSTGLV 168


>ref|XP_002309642.1| predicted protein [Populus trichocarpa] gi|222855618|gb|EEE93165.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/102 (40%), Positives = 56/102 (54%)
 Frame = +3

Query: 3   RGQLRKLLNKLVPLNYTTPNTEFFTKTLPQLSPESPLVNPMLPILSTTESNSFSEPYNYH 182
           +GQL+ LLNKL+  N T          LPQ    +PLV P     S TESNS S+ +N+ 
Sbjct: 51  KGQLQNLLNKLILSNPTE-----LLPFLPQAQSGNPLVIPARGNSSITESNSLSDTHNHQ 105

Query: 183 SQNSSPASSVFEPVTSTELSSPHAGVLSSKIGFVNQPFVQDY 308
           S  SSP  S F+ + S +  S +    SS +GFV+  FV++Y
Sbjct: 106 SHGSSPVDSFFDAIASPDFCSTNMEE-SSHMGFVSNTFVKEY 146


>ref|XP_002298377.1| predicted protein [Populus trichocarpa] gi|222845635|gb|EEE83182.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/66 (50%), Positives = 43/66 (65%)
 Frame = +3

Query: 138 STTESNSFSEPYNYHSQNSSPASSVFEPVTSTELSSPHAGVLSSKIGFVNQPFVQDYKGT 317
           S TESNS S+ YN+ S  SSP  S+ + VTS + SS +    SS +GFVN+  VQ+Y G+
Sbjct: 67  SITESNSLSDTYNHQSHGSSPVESLIDAVTSPDFSSINMAE-SSHMGFVNKALVQEYDGS 125

Query: 318 SPTTLV 335
            PT LV
Sbjct: 126 IPTGLV 131


Top