BLASTX nr result

ID: Cnidium21_contig00028916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028916
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536091.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   142   2e-32
ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vit...   141   6e-32
ref|XP_002513986.1| zinc finger protein, putative [Ricinus commu...   137   1e-30
ref|XP_002512343.1| ring finger protein, putative [Ricinus commu...   133   1e-29
ref|XP_003554663.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   132   2e-29

>ref|XP_003536091.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 359

 Score =  142 bits (359), Expect = 2e-32
 Identities = 81/165 (49%), Positives = 95/165 (57%)
 Frame = +3

Query: 3   CLNEFEDEETLRLLPKCDHVFHLECIDMWLASHTTCPVCRADLVPVAGEPVEVLQGLPVD 182
           CLNEFED ETLRL+PKCDHVFH ECID WLASHTTCPVCRA+LVP  GE V    G+P+ 
Sbjct: 120 CLNEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPQPGESV---HGIPIL 176

Query: 183 NLVERDQPQGEVHVIIVPDENQEKPTNHLLEMPKPDVMKRAGSLXXXXXXXXXXXXXXXX 362
           N  E  + Q E    +V  E Q++        PKP V      L                
Sbjct: 177 NAPEDIEAQHEAQNDLVEPEQQQQD-------PKPPVPTEPQVLSLNQTLNRNRTRGSRS 229

Query: 363 XXKLLEFGNLFPRSHSTGHSLVQQGENVDRYTLRLPEELRNTIIK 497
                     FPRSHSTGHSLV  GE+ +R+TLRLPEE+R  I++
Sbjct: 230 GRP-----RRFPRSHSTGHSLVLPGEDTERFTLRLPEEVRKQILQ 269


>ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vitis vinifera]
          Length = 409

 Score =  141 bits (355), Expect = 6e-32
 Identities = 78/168 (46%), Positives = 97/168 (57%)
 Frame = +3

Query: 3   CLNEFEDEETLRLLPKCDHVFHLECIDMWLASHTTCPVCRADLVPVAGEPVEVLQGLPVD 182
           CLNEFED+ETLRLLPKC+HVFH +CID+WLASH TCPVCRA+L P  GE  +    +P+ 
Sbjct: 146 CLNEFEDDETLRLLPKCNHVFHSDCIDLWLASHVTCPVCRANLTPKPGE--KFCAPVPIF 203

Query: 183 NLVERDQPQGEVHVIIVPDENQEKPTNHLLEMPKPDVMKRAGSLXXXXXXXXXXXXXXXX 362
              E +  + +  V IV   NQ       ++   PDVM                      
Sbjct: 204 G-PETESDESDTRVEIVETPNQ---VPIAVDAQSPDVMNHGRDTPNRPPRSRSIR----- 254

Query: 363 XXKLLEFGNLFPRSHSTGHSLVQQGENVDRYTLRLPEELRNTIIKRSL 506
                    +FPRSHSTGHSL+Q GEN +R+TLRLPEE+RN I+  SL
Sbjct: 255 ----ARITGMFPRSHSTGHSLIQPGENRERFTLRLPEEIRNQIMNTSL 298


>ref|XP_002513986.1| zinc finger protein, putative [Ricinus communis]
           gi|223547072|gb|EEF48569.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 436

 Score =  137 bits (344), Expect = 1e-30
 Identities = 75/179 (41%), Positives = 101/179 (56%), Gaps = 11/179 (6%)
 Frame = +3

Query: 3   CLNEFEDEETLRLLPKCDHVFHLECIDMWLASHTTCPVCRADLVPVAGE----PVEVLQ- 167
           CLNEFED++TLRL PKC HVFH +CID WLAS+TTCPVCRA+LVP  G+     V   + 
Sbjct: 142 CLNEFEDDQTLRLTPKCSHVFHPDCIDAWLASNTTCPVCRANLVPKPGDLAFDSVSFFEP 201

Query: 168 ------GLPVDNLVERDQPQGEVHVIIVPDENQEKPTNHLLEMPKPDVMKRAGSLXXXXX 329
                  +  D L ER   + +  V+I   ++ ++    +     PDV+  + +      
Sbjct: 202 NNTNNTSVEPDQLQERPNDETQNGVLIRVSDDHDRSRPEVQNQQSPDVISLSTASQNRPP 261

Query: 330 XXXXXXXXXXXXXKLLEFGNLFPRSHSTGHSLVQQGENVDRYTLRLPEELRNTIIKRSL 506
                            F  LFPRSHSTGHSLVQ GEN+DR+TLRLPE++R+ ++   L
Sbjct: 262 RSWSTGW---------RFARLFPRSHSTGHSLVQPGENLDRFTLRLPEDVRSQLLNTHL 311


>ref|XP_002512343.1| ring finger protein, putative [Ricinus communis]
           gi|223548304|gb|EEF49795.1| ring finger protein,
           putative [Ricinus communis]
          Length = 380

 Score =  133 bits (335), Expect = 1e-29
 Identities = 77/171 (45%), Positives = 97/171 (56%), Gaps = 3/171 (1%)
 Frame = +3

Query: 3   CLNEFEDEETLRLLPKCDHVFHLECIDMWLASHTTCPVCRADLVP-VAGEPVEVLQGLPV 179
           CL EFED+ETLRLLPKCDHVFH +CID WLASHTTCPVCR++L P     P +  + LP 
Sbjct: 126 CLCEFEDDETLRLLPKCDHVFHPDCIDAWLASHTTCPVCRSNLTPQPVDPPTQTTESLPD 185

Query: 180 DNLVERDQPQGEVHVIIVPD--ENQEKPTNHLLEMPKPDVMKRAGSLXXXXXXXXXXXXX 353
            +     Q +  V +   P+  EN +     +   P+P+VM    +L             
Sbjct: 186 SSSDLEAQNEAVVELEPQPEVCENAQ-----VAVAPEPEVMSVNQTLNRNRTRGSRSGRP 240

Query: 354 XXXXXKLLEFGNLFPRSHSTGHSLVQQGENVDRYTLRLPEELRNTIIKRSL 506
                      + FPRSHSTGHSL+Q GEN DR+TLRLP E+R  I+ R L
Sbjct: 241 -----------SKFPRSHSTGHSLIQPGENTDRFTLRLPVEVRKQIMNREL 280


>ref|XP_003554663.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 375

 Score =  132 bits (333), Expect = 2e-29
 Identities = 79/173 (45%), Positives = 93/173 (53%), Gaps = 5/173 (2%)
 Frame = +3

Query: 3   CLNEFEDEETLRLLPKCDHVFHLECIDMWLASHTTCPVCRADLVPVAGEPVEVLQG---- 170
           CL EFED ETLRL+PKCDHVFH ECID WL SHTTCPVCRA+LVP   E   +  G    
Sbjct: 122 CLCEFEDTETLRLIPKCDHVFHPECIDEWLGSHTTCPVCRANLVPTDSEDA-IANGNANG 180

Query: 171 -LPVDNLVERDQPQGEVHVIIVPDENQEKPTNHLLEMPKPDVMKRAGSLXXXXXXXXXXX 347
            +PV     RD       V   P++   +    L   P+P+V+    +L           
Sbjct: 181 VVPVPETFTRDIEAQNDAVEAAPEQQNAEADPVL---PEPEVVSLDKTLNRNRTRGSRSN 237

Query: 348 XXXXXXXKLLEFGNLFPRSHSTGHSLVQQGENVDRYTLRLPEELRNTIIKRSL 506
                          FPRSHSTGHSLVQ GEN DR+TLRLP E+R  +I R L
Sbjct: 238 RP-----------RRFPRSHSTGHSLVQPGENTDRFTLRLPLEVRKQLINRQL 279


Top