BLASTX nr result

ID: Cnidium21_contig00028900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028900
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putativ...   119   2e-25
ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
emb|CBI40063.3| unnamed protein product [Vitis vinifera]              111   7e-23
ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 prote...   108   3e-22
ref|XP_004159806.1| PREDICTED: uncharacterized protein LOC101227...   105   3e-21

>ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis]
           gi|223549451|gb|EEF50939.1| Sister chromatid cohesion 1
           protein, putative [Ricinus communis]
          Length = 781

 Score =  119 bits (299), Expect = 2e-25
 Identities = 58/93 (62%), Positives = 74/93 (79%)
 Frame = +3

Query: 54  LDMILLDEVPVITYRILAYLLLGVVRIYSKKVEYLFCDCNNVLSEVRHFITSKKCDAHIE 233
           +D IL DE   +TYR+LAYLLLGVVRI+SKKVEYLF DCN VL +++ F+   K  A +E
Sbjct: 41  VDKILQDEFDAVTYRVLAYLLLGVVRIFSKKVEYLFDDCNKVLLKIKDFMVRNKERALME 100

Query: 234 VMCAPYSSITVPERFELDAFDLEIIENFNRDHI 332
            +CAPYSSIT+PERFELDAF+LEIIE+ +  ++
Sbjct: 101 TLCAPYSSITLPERFELDAFNLEIIEDISGGNV 133


>ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|222874175|gb|EEF11306.1|
           predicted protein [Populus trichocarpa]
          Length = 770

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/87 (66%), Positives = 67/87 (77%)
 Frame = +3

Query: 54  LDMILLDEVPVITYRILAYLLLGVVRIYSKKVEYLFCDCNNVLSEVRHFITSKKCDAHIE 233
           +D IL D   V+TYR+LAYLLLGVVRIYSKKVEYLF DCN VL  V+ F+   K    +E
Sbjct: 41  VDKILQDGFDVVTYRVLAYLLLGVVRIYSKKVEYLFDDCNKVLLNVKDFVLCNKDGILVE 100

Query: 234 VMCAPYSSITVPERFELDAFDLEIIEN 314
            + APY SIT+PERFELDAFDLEIIE+
Sbjct: 101 TLQAPYFSITLPERFELDAFDLEIIED 127


>emb|CBI40063.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/96 (56%), Positives = 73/96 (76%)
 Frame = +3

Query: 54  LDMILLDEVPVITYRILAYLLLGVVRIYSKKVEYLFCDCNNVLSEVRHFITSKKCDAHIE 233
           +D IL+DEVPV+ YRIL Y+LLGVVRIYSKKVEYLF DC  +L +V+ F   K+ +A +E
Sbjct: 41  VDKILVDEVPVLAYRILGYILLGVVRIYSKKVEYLFDDCQKMLIKVKDFAVGKQFNADME 100

Query: 234 VMCAPYSSITVPERFELDAFDLEIIENFNRDHIKMQ 341
              AP  SIT+P+ FELDAFDLE++E+ +  +++ Q
Sbjct: 101 GFSAPCFSITLPKTFELDAFDLEVLEDVSGGNVRPQ 136


>ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Vitis
           vinifera]
          Length = 756

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/93 (56%), Positives = 71/93 (76%)
 Frame = +3

Query: 63  ILLDEVPVITYRILAYLLLGVVRIYSKKVEYLFCDCNNVLSEVRHFITSKKCDAHIEVMC 242
           IL+DEVPV+ YRIL Y+LLGVVRIYSKKVEYLF DC  +L +V+ F   K+ +A +E   
Sbjct: 211 ILVDEVPVLAYRILGYILLGVVRIYSKKVEYLFDDCQKMLIKVKDFAVGKQFNADMEGFS 270

Query: 243 APYSSITVPERFELDAFDLEIIENFNRDHIKMQ 341
           AP  SIT+P+ FELDAFDLE++E+ +  +++ Q
Sbjct: 271 APCFSITLPKTFELDAFDLEVLEDVSGGNVRPQ 303


>ref|XP_004159806.1| PREDICTED: uncharacterized protein LOC101227114 [Cucumis sativus]
          Length = 320

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/92 (54%), Positives = 63/92 (68%)
 Frame = +3

Query: 54  LDMILLDEVPVITYRILAYLLLGVVRIYSKKVEYLFCDCNNVLSEVRHFITSKKCDAHIE 233
           +D IL DE+  +TYR++AYLLLG+ RIYSKKVEYL+ DCN VL+E+  F+   K      
Sbjct: 41  VDKILQDELNAVTYRVMAYLLLGIARIYSKKVEYLYTDCNKVLTEINEFVVRTKNSTRKG 100

Query: 234 VMCAPYSSITVPERFELDAFDLEIIENFNRDH 329
               PY +IT+PERFELD FDL IIE+    H
Sbjct: 101 TKQTPYYAITLPERFELDEFDLGIIEDLTGSH 132


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