BLASTX nr result

ID: Cnidium21_contig00028868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028868
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]     133   1e-29
dbj|BAK03285.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   3e-06
dbj|BAH01533.1| unnamed protein product [Oryza sativa Japonica G...    56   4e-06
gb|EAY96730.1| hypothetical protein OsI_18646 [Oryza sativa Indi...    56   4e-06
gb|AAT77341.1| putative fibrillarin protein [Oryza sativa Japoni...    56   4e-06

>dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]
          Length = 475

 Score =  133 bits (335), Expect = 1e-29
 Identities = 76/147 (51%), Positives = 94/147 (63%)
 Frame = -2

Query: 443 LKKFLEDNLSQPSKLIHTVATCDALLNGMIGRKTGLPSRSAIVIDDVMRGLREKIDKLIG 264
           L KF++ N   P    H + T D +L   I     L   S+++   VMRGLREKIDKLIG
Sbjct: 138 LIKFIQKNFEPPFHR-HVLTTADPVLGEKIVNNVRLSDHSSLLTLSVMRGLREKIDKLIG 196

Query: 263 LEPGELEKAQLNLARLYNNQTCTETNTKSPFVVXXXXXXXXSLQQEVGVVPHKFEGVFKA 84
           L+PGEL+KAQ  LA LY +Q  T  +TKSP  V         LQ++V VVPH+FEG F A
Sbjct: 197 LQPGELDKAQRQLAHLYKDQKRTILDTKSPVPV----SSSSFLQEQVMVVPHRFEGFFNA 252

Query: 83  KGIEDVLCTRNLVLGQTLYGEKLIRVQ 3
           KG +++LCTRNLV G+ LYGEKLI VQ
Sbjct: 253 KGKKNILCTRNLVPGEALYGEKLIHVQ 279


>dbj|BAK03285.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 242

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/42 (59%), Positives = 33/42 (78%)
 Frame = -2

Query: 128 EVGVVPHKFEGVFKAKGIEDVLCTRNLVLGQTLYGEKLIRVQ 3
           +V VVPHK +GVF AK  ED LCT+N+V G+++YGEK + VQ
Sbjct: 6   KVVVVPHKHDGVFIAKAKEDALCTKNMVAGESVYGEKRVSVQ 47


>dbj|BAH01533.1| unnamed protein product [Oryza sativa Japonica Group]
           gi|222630379|gb|EEE62511.1| hypothetical protein
           OsJ_17309 [Oryza sativa Japonica Group]
          Length = 309

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = -2

Query: 128 EVGVVPHKFEGVFKAKGIEDVLCTRNLVLGQTLYGEKLIRVQ 3
           +V VVPHK +GVF AK  ED LCT+N+V G+++YGEK I VQ
Sbjct: 70  KVVVVPHKHDGVFIAKAKEDALCTKNMVPGESVYGEKRISVQ 111


>gb|EAY96730.1| hypothetical protein OsI_18646 [Oryza sativa Indica Group]
          Length = 269

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = -2

Query: 128 EVGVVPHKFEGVFKAKGIEDVLCTRNLVLGQTLYGEKLIRVQ 3
           +V VVPHK +GVF AK  ED LCT+N+V G+++YGEK I VQ
Sbjct: 53  KVVVVPHKHDGVFIAKAKEDALCTKNMVPGESVYGEKRISVQ 94


>gb|AAT77341.1| putative fibrillarin protein [Oryza sativa Japonica Group]
           gi|52353729|gb|AAU44295.1| putative fibrillarin [Oryza
           sativa Japonica Group]
          Length = 351

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = -2

Query: 128 EVGVVPHKFEGVFKAKGIEDVLCTRNLVLGQTLYGEKLIRVQ 3
           +V VVPHK +GVF AK  ED LCT+N+V G+++YGEK I VQ
Sbjct: 70  KVVVVPHKHDGVFIAKAKEDALCTKNMVPGESVYGEKRISVQ 111


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