BLASTX nr result

ID: Cnidium21_contig00028858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028858
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285434.1| PREDICTED: uncharacterized protein KIAA0930 ...    87   1e-15
ref|XP_002320676.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|NP_849828.1| protein CW7 [Arabidopsis thaliana] gi|332195461...    81   1e-13
ref|NP_564743.1| protein CW7 [Arabidopsis thaliana] gi|6520212|d...    81   1e-13
gb|AAK62787.1|AC027036_8 unknown protein [Arabidopsis thaliana]        81   1e-13

>ref|XP_002285434.1| PREDICTED: uncharacterized protein KIAA0930 homolog [Vitis
           vinifera] gi|302142167|emb|CBI19370.3| unnamed protein
           product [Vitis vinifera]
          Length = 396

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/70 (65%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
 Frame = -3

Query: 264 SKKKSRISEKVRKAATVASATAKHVYAGGAS--QSSDKMHPLKCCLMSISLPWECIAYDL 91
           SK+   I   VRKAATVAS  AKH YA  A+   S ++M PLKCCLMSISLPWE IAYDL
Sbjct: 327 SKRGFGIGTIVRKAATVASVAAKHAYAAAAATRSSDEEMLPLKCCLMSISLPWEHIAYDL 386

Query: 90  LFKGVPQVNL 61
           +FKG P VNL
Sbjct: 387 MFKGSPPVNL 396


>ref|XP_002320676.1| predicted protein [Populus trichocarpa] gi|222861449|gb|EEE98991.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/70 (62%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
 Frame = -3

Query: 264 SKKKSRISEKVRKAATVASATAKHVYAGGASQ--SSDKMHPLKCCLMSISLPWECIAYDL 91
           SKK   I     KAA+VAS  AKH +A  +S   S D+M PLKCCLMSISLPWE IAYDL
Sbjct: 323 SKKGFGIGSVFLKAASVASVAAKHAFAAASSSVSSDDEMLPLKCCLMSISLPWEYIAYDL 382

Query: 90  LFKGVPQVNL 61
           LFKG P VN+
Sbjct: 383 LFKGSPPVNM 392


>ref|NP_849828.1| protein CW7 [Arabidopsis thaliana] gi|332195461|gb|AEE33582.1|
           protein CW7 [Arabidopsis thaliana]
           gi|343455573|gb|AEM36359.1| At1g59520 [Arabidopsis
           thaliana]
          Length = 388

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/70 (58%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = -3

Query: 264 SKKKSRISEKVRKAATVASATAKHVYAGG-ASQSSDKMHPLKCCLMSISLPWECIAYDLL 88
           SKK   +    RKAA+VAS  AKH  A   AS   D+M PLKCCLMSISLPW+ IA+DLL
Sbjct: 319 SKKSIDLGSIFRKAASVASVAAKHAIAAATASYDEDEMFPLKCCLMSISLPWDTIAHDLL 378

Query: 87  FKGVPQVNLQ 58
           FK  P VN++
Sbjct: 379 FKATPPVNME 388


>ref|NP_564743.1| protein CW7 [Arabidopsis thaliana] gi|6520212|dbj|BAA87952.1| CW7
           [Arabidopsis thaliana] gi|28466965|gb|AAO44091.1|
           At1g59520 [Arabidopsis thaliana]
           gi|110743903|dbj|BAE99786.1| CW7 [Arabidopsis thaliana]
           gi|332195462|gb|AEE33583.1| protein CW7 [Arabidopsis
           thaliana]
          Length = 388

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/70 (58%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = -3

Query: 264 SKKKSRISEKVRKAATVASATAKHVYAGG-ASQSSDKMHPLKCCLMSISLPWECIAYDLL 88
           SKK   +    RKAA+VAS  AKH  A   AS   D+M PLKCCLMSISLPW+ IA+DLL
Sbjct: 319 SKKSIDLGSIFRKAASVASVAAKHAIAAATASYDEDEMFPLKCCLMSISLPWDTIAHDLL 378

Query: 87  FKGVPQVNLQ 58
           FK  P VN++
Sbjct: 379 FKATPPVNME 388


>gb|AAK62787.1|AC027036_8 unknown protein [Arabidopsis thaliana]
          Length = 749

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/70 (58%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = -3

Query: 264 SKKKSRISEKVRKAATVASATAKHVYAGG-ASQSSDKMHPLKCCLMSISLPWECIAYDLL 88
           SKK   +    RKAA+VAS  AKH  A   AS   D+M PLKCCLMSISLPW+ IA+DLL
Sbjct: 680 SKKSIDLGSIFRKAASVASVAAKHAIAAATASYDEDEMFPLKCCLMSISLPWDTIAHDLL 739

Query: 87  FKGVPQVNLQ 58
           FK  P VN++
Sbjct: 740 FKATPPVNME 749


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