BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028847
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|2...   226   2e-57
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   224   7e-57
gb|AFN53666.1| hypothetical protein [Linum usitatissimum]             218   3e-55
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...   215   3e-54
ref|NP_180537.1| pentatricopeptide repeat-containing protein [Ar...   203   1e-50

>ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|222850518|gb|EEE88065.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score =  226 bits (576), Expect = 2e-57
 Identities = 111/146 (76%), Positives = 122/146 (83%)
 Frame = -3

Query: 443 KGGNLEKTLEVFESVSWRDVFVWSAMIAGFAMHGRGKDAIHLFMKMQESKVKPNAVTFTN 264
           K G+LEK LEVF SV  RDVFVWSAMIAG AMHG G+ AI LF KMQE+KVKPNAVTFTN
Sbjct: 412 KCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTN 471

Query: 263 VLSACSHTGLVDQGKELFYQMERVYGVAPGVKHYACMIDILGRAGKLEEATELINKMPIT 84
           +L ACSH+GLVD+G+  F QM  VYGV PG KHYACM+DILGRAG LEEA ELI KMPI 
Sbjct: 472 LLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIV 531

Query: 83  PGASVWGALLGACRLHGNVDLAERAC 6
           P ASVWGALLGACR++GNV+LAE AC
Sbjct: 532 PSASVWGALLGACRIYGNVELAEMAC 557



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/139 (27%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
 Frame = -3

Query: 443 KGGNLEKTLEVFESVSWRDVFVWSAMIAGFAMHGRGKDAIHLFMKMQESK-VKPNAVTFT 267
           K G+ +    VF+ +   D+  W+A+I+ +  +G+ K+A+ +F ++Q +K  KPN VT  
Sbjct: 310 KVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLA 369

Query: 266 NVLSACSHTGLVDQGKELFYQMERVYGVAPGVKHYACMIDILGRAGKLEEATELINKMPI 87
           + L+AC+  G +D G  +   +++  G+         +ID+  + G LE+A E+   +  
Sbjct: 370 STLAACAQLGAMDLGGWIHVYIKK-QGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVE- 427

Query: 86  TPGASVWGALLGACRLHGN 30
                VW A++    +HG+
Sbjct: 428 RRDVFVWSAMIAGLAMHGH 446



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/142 (30%), Positives = 72/142 (50%)
 Frame = -3

Query: 437 GNLEKTLEVFESVSWRDVFVWSAMIAGFAMHGRGKDAIHLFMKMQESKVKPNAVTFTNVL 258
           G+L+    VF  +  +D+  W++MI+GF   G  ++A+ LF +M+    +PN VT   VL
Sbjct: 180 GDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVL 239

Query: 257 SACSHTGLVDQGKELFYQMERVYGVAPGVKHYACMIDILGRAGKLEEATELINKMPITPG 78
           SAC+    ++ G+     +ER  G+   +     M+D+  + G LE+A  L +KM     
Sbjct: 240 SACAKRIDLEFGRWACDYIER-NGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDI 298

Query: 77  ASVWGALLGACRLHGNVDLAER 12
            S W  ++      G+ D A R
Sbjct: 299 VS-WTTMIDGYAKVGDYDAARR 319


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  224 bits (570), Expect = 7e-57
 Identities = 109/146 (74%), Positives = 120/146 (82%)
 Frame = -3

Query: 443 KGGNLEKTLEVFESVSWRDVFVWSAMIAGFAMHGRGKDAIHLFMKMQESKVKPNAVTFTN 264
           K G+L+K L VF SV  +DVFVWSAMIAG AMHG GKDAI LF KMQE KVKPNAVTFTN
Sbjct: 417 KCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTN 476

Query: 263 VLSACSHTGLVDQGKELFYQMERVYGVAPGVKHYACMIDILGRAGKLEEATELINKMPIT 84
           +L ACSH GLV++G+  F QME VYGV PGVKHYACM+DILGRAG LEEA ELI KMP+ 
Sbjct: 477 ILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMA 536

Query: 83  PGASVWGALLGACRLHGNVDLAERAC 6
           P ASVWGALLGAC +H NV LAE+AC
Sbjct: 537 PAASVWGALLGACTIHENVVLAEQAC 562



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 45/143 (31%), Positives = 72/143 (50%)
 Frame = -3

Query: 443 KGGNLEKTLEVFESVSWRDVFVWSAMIAGFAMHGRGKDAIHLFMKMQESKVKPNAVTFTN 264
           K G L     VF ++  RDV  W++MI  F   G  ++A+ LF +M+   VKPN +T   
Sbjct: 183 KCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVG 242

Query: 263 VLSACSHTGLVDQGKELFYQMERVYGVAPGVKHYACMIDILGRAGKLEEATELINKMPIT 84
           VLSAC+     + G+ +   +ER   +   +     M+D+  + G +E+A  L +KMP  
Sbjct: 243 VLSACAKKSDFEFGRWVHSYIER-NRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEK 301

Query: 83  PGASVWGALLGACRLHGNVDLAE 15
              S    L+G  ++ G  D A+
Sbjct: 302 DIVSWTTMLVGYAKI-GEYDAAQ 323



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 37/139 (26%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
 Frame = -3

Query: 443 KGGNLEKTLEVFESVSWRDVFVWSAMIAGFAMHGRGKDAIHLFMKMQESKV-KPNAVTFT 267
           K G  +    +F+++  +D+  W+A+I+ +   G+ K+A+ LF ++Q SK  KP+ VT  
Sbjct: 315 KIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLV 374

Query: 266 NVLSACSHTGLVDQGKELFYQMERVYGVAPGVKHYACMIDILGRAGKLEEATELINKMPI 87
           + LSAC+  G +D G  +   +++  G+         +ID+  + G L++A  + + +  
Sbjct: 375 STLSACAQLGAMDLGGWIHVYIKK-QGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVE- 432

Query: 86  TPGASVWGALLGACRLHGN 30
                VW A++    +HG+
Sbjct: 433 RKDVFVWSAMIAGLAMHGH 451


>gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  218 bits (556), Expect = 3e-55
 Identities = 100/146 (68%), Positives = 123/146 (84%)
 Frame = -3

Query: 443 KGGNLEKTLEVFESVSWRDVFVWSAMIAGFAMHGRGKDAIHLFMKMQESKVKPNAVTFTN 264
           K G++EK +EVF S+  +DVFVWSAMIAG AMHGRG+ AI LF+ MQE++VKPN+VTFTN
Sbjct: 524 KSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTN 583

Query: 263 VLSACSHTGLVDQGKELFYQMERVYGVAPGVKHYACMIDILGRAGKLEEATELINKMPIT 84
           +L ACSH+GLVD+GK LF +MERVYGV P  KHY+CM+D+LGRAG LEEA + I  MP+ 
Sbjct: 584 LLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLA 643

Query: 83  PGASVWGALLGACRLHGNVDLAERAC 6
           P ASVWGALLGAC +HGN++LAE+AC
Sbjct: 644 PSASVWGALLGACCIHGNLELAEKAC 669



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/137 (27%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
 Frame = -3

Query: 416 EVFESVSWRDVFVWSAMIAGFAMHGRGKDAIHLFMKMQ--ESKVKPNAVTFTNVLSACSH 243
           ++F+S+  +D+  W+ +I+G+   GR K+A+ +F ++Q  +S  +P+ VT  + LSAC+ 
Sbjct: 430 DIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQ 489

Query: 242 TGLVDQGKEL--FYQMERVYGVAPGVKHYACMIDILGRAGKLEEATELINKMPITPGASV 69
            G +D G+ +  + + ER   +         +ID+  ++G +E+A E+ + +       V
Sbjct: 490 LGAMDIGEWIHGYIKKER---IQLNRNLATSLIDMYSKSGDVEKAIEVFHSIG-NKDVFV 545

Query: 68  WGALLGACRLHGNVDLA 18
           W A++    +HG  + A
Sbjct: 546 WSAMIAGLAMHGRGEAA 562



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
 Frame = -3

Query: 437 GNLEKTLEVFESVSW--RDVFVWSAMIAGFAMHGRGKDAIHLFMKMQESKVKPNAVTFTN 264
           G+L+    VFE +    +D+  W++M+ GF   G    A+ LF +M+   V PNAVT  +
Sbjct: 289 GHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVS 348

Query: 263 VLSACSHTGLVDQGKELFYQMERVYGVAPGVKHYACMIDILGRAGKLEEATELINKM 93
           V+SAC+ T  +  G+++   ++R   +   +      ID+  + G++E A  L + M
Sbjct: 349 VMSACAKTMNLTLGRKVCDYIDR-NEMMMNLNVCNATIDMFVKCGEVEIARGLFDNM 404


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449470513|ref|XP_004152961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449523079|ref|XP_004168552.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  215 bits (547), Expect = 3e-54
 Identities = 106/145 (73%), Positives = 119/145 (82%)
 Frame = -3

Query: 443 KGGNLEKTLEVFESVSWRDVFVWSAMIAGFAMHGRGKDAIHLFMKMQESKVKPNAVTFTN 264
           K G+LEK LEVF SV  RDV+VWSAMIAG  MHGRGK AI LF +MQE+KVKPN+VTFTN
Sbjct: 407 KCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTN 466

Query: 263 VLSACSHTGLVDQGKELFYQMERVYGVAPGVKHYACMIDILGRAGKLEEATELINKMPIT 84
           VL ACSH GLVD+G+  F++ME VYGV P +KHYACM+DILGRAG LEEA ELIN+M  T
Sbjct: 467 VLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTT 526

Query: 83  PGASVWGALLGACRLHGNVDLAERA 9
           P ASVWGALLGAC LH NV+L E A
Sbjct: 527 PSASVWGALLGACSLHMNVELGELA 551



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/140 (31%), Positives = 76/140 (54%)
 Frame = -3

Query: 437 GNLEKTLEVFESVSWRDVFVWSAMIAGFAMHGRGKDAIHLFMKMQESKVKPNAVTFTNVL 258
           G+L     +F+ +S +DV  W++MI+ FA     +DA+ LF+KM+   V PN+VT   VL
Sbjct: 175 GDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVL 234

Query: 257 SACSHTGLVDQGKELFYQMERVYGVAPGVKHYACMIDILGRAGKLEEATELINKMPITPG 78
           SAC+    ++ G+ +   +ER  G+   +     M+D+  + G +++A +L ++MP    
Sbjct: 235 SACAKKLDLEFGRWVCSYIER-KGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDV 293

Query: 77  ASVWGALLGACRLHGNVDLA 18
            S W  +L      G+ D A
Sbjct: 294 FS-WTIMLDGYAKMGDYDAA 312



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/138 (26%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
 Frame = -3

Query: 443 KGGNLEKTLEVFESVSWRDVFVWSAMIAGFAMHGRGKDAIHLFMKMQESKV-KPNAVTFT 267
           K G+ +    VF ++  +++  W+ +I+ +  +G+ K+A+ +F ++Q SK+ KP+ VT  
Sbjct: 305 KMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLV 364

Query: 266 NVLSACSHTGLVDQGKELFYQMERVYGVAPGVKHYACMIDILGRAGKLEEATELINKMPI 87
           + LSAC+  G +D G  +   ++R  G+       + ++D+  + G LE+A E+   +  
Sbjct: 365 STLSACAQLGAIDLGGWIHVYIKR-EGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVE- 422

Query: 86  TPGASVWGALLGACRLHG 33
                VW A++    +HG
Sbjct: 423 ERDVYVWSAMIAGLGMHG 440


>ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75100656|sp|O82380.1|PP175_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
           gi|3582328|gb|AAC35225.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253207|gb|AEC08301.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 738

 Score =  203 bits (516), Expect = 1e-50
 Identities = 94/146 (64%), Positives = 114/146 (78%)
 Frame = -3

Query: 443 KGGNLEKTLEVFESVSWRDVFVWSAMIAGFAMHGRGKDAIHLFMKMQESKVKPNAVTFTN 264
           K G+LEK+ EVF SV  RDVFVWSAMI G AMHG G +A+ +F KMQE+ VKPN VTFTN
Sbjct: 412 KCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTN 471

Query: 263 VLSACSHTGLVDQGKELFYQMERVYGVAPGVKHYACMIDILGRAGKLEEATELINKMPIT 84
           V  ACSHTGLVD+ + LF+QME  YG+ P  KHYAC++D+LGR+G LE+A + I  MPI 
Sbjct: 472 VFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIP 531

Query: 83  PGASVWGALLGACRLHGNVDLAERAC 6
           P  SVWGALLGAC++H N++LAE AC
Sbjct: 532 PSTSVWGALLGACKIHANLNLAEMAC 557



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/115 (31%), Positives = 61/115 (53%)
 Frame = -3

Query: 437 GNLEKTLEVFESVSWRDVFVWSAMIAGFAMHGRGKDAIHLFMKMQESKVKPNAVTFTNVL 258
           G+L+   +VF ++  +DV  W++MI GF   G    A+ LF KM+   VK + VT   VL
Sbjct: 180 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239

Query: 257 SACSHTGLVDQGKELFYQMERVYGVAPGVKHYACMIDILGRAGKLEEATELINKM 93
           SAC+    ++ G+++   +E    V   +     M+D+  + G +E+A  L + M
Sbjct: 240 SACAKIRNLEFGRQVCSYIEE-NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAM 293