BLASTX nr result

ID: Cnidium21_contig00028846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028846
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31582.3| unnamed protein product [Vitis vinifera]               83   5e-14
ref|XP_002281465.1| PREDICTED: uncharacterized protein LOC100256...    83   5e-14
emb|CAN66597.1| hypothetical protein VITISV_030013 [Vitis vinifera]    83   5e-14
ref|XP_002316248.1| predicted protein [Populus trichocarpa] gi|2...    80   4e-13
ref|XP_002530394.1| conserved hypothetical protein [Ricinus comm...    80   6e-13

>emb|CBI31582.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 50/122 (40%), Positives = 72/122 (59%)
 Frame = +3

Query: 114 SGGRKNVLGSGGGCVKRKCAGTGVFLPRRSPDPVDSRVKSGCSTGFTQQRAGQVMINMNH 293
           SG R   LG  G  +KR+ AGTGVFLPRR  +  DSR K GCST     R  Q  +N+N 
Sbjct: 130 SGMRAVFLGGSG--LKRESAGTGVFLPRRFGNASDSRKKPGCSTVLLPARVVQA-LNLNF 186

Query: 294 DNLMNHAEAQARFLDGVTPNHDVMVMRRNAVLAQQWRNGVXXXXXXXXXXXYDMHLPQEW 473
           +++ +H  +Q  F  GV P+++ ++ RRNA+++QQ RN             +++ LPQEW
Sbjct: 187 EDMGSH--SQPHFNGGVAPDYEALMARRNALISQQKRN-----LRPEGTMNHEIRLPQEW 239

Query: 474 SY 479
           +Y
Sbjct: 240 TY 241


>ref|XP_002281465.1| PREDICTED: uncharacterized protein LOC100256408 [Vitis vinifera]
          Length = 417

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 50/122 (40%), Positives = 72/122 (59%)
 Frame = +3

Query: 114 SGGRKNVLGSGGGCVKRKCAGTGVFLPRRSPDPVDSRVKSGCSTGFTQQRAGQVMINMNH 293
           SG R   LG  G  +KR+ AGTGVFLPRR  +  DSR K GCST     R  Q  +N+N 
Sbjct: 306 SGMRAVFLGGSG--LKRESAGTGVFLPRRFGNASDSRKKPGCSTVLLPARVVQA-LNLNF 362

Query: 294 DNLMNHAEAQARFLDGVTPNHDVMVMRRNAVLAQQWRNGVXXXXXXXXXXXYDMHLPQEW 473
           +++ +H  +Q  F  GV P+++ ++ RRNA+++QQ RN             +++ LPQEW
Sbjct: 363 EDMGSH--SQPHFNGGVAPDYEALMARRNALISQQKRN-----LRPEGTMNHEIRLPQEW 415

Query: 474 SY 479
           +Y
Sbjct: 416 TY 417


>emb|CAN66597.1| hypothetical protein VITISV_030013 [Vitis vinifera]
          Length = 425

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 51/122 (41%), Positives = 73/122 (59%)
 Frame = +3

Query: 114 SGGRKNVLGSGGGCVKRKCAGTGVFLPRRSPDPVDSRVKSGCSTGFTQQRAGQVMINMNH 293
           SG R   LG  G  +KR+ AGTGVFLPRR  +  DSR K GCST     R  Q  +N+N 
Sbjct: 314 SGMRAVFLGGSG--LKRESAGTGVFLPRRFGNXSDSRKKPGCSTVLLPARVVQA-LNLNF 370

Query: 294 DNLMNHAEAQARFLDGVTPNHDVMVMRRNAVLAQQWRNGVXXXXXXXXXXXYDMHLPQEW 473
           +++ +H  +Q  F  GV P+++ ++ RRNA+++QQ RN             +++ LPQEW
Sbjct: 371 EDMGSH--SQPHFNGGVAPDYEALMARRNALISQQKRN-----LRPEXTMNHEIRLPQEW 423

Query: 474 SY 479
           +Y
Sbjct: 424 TY 425


>ref|XP_002316248.1| predicted protein [Populus trichocarpa] gi|222865288|gb|EEF02419.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 48/114 (42%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
 Frame = +3

Query: 144 GGGCVKRKCAGTGVFLPRRSPDPVDSRVKSGCSTGFTQQRAGQVMINMNHDNLMNHAEAQ 323
           GG  VKR+CAGTGVFLPRR  +P D + KSGCST     +  Q  +N+N D++     AQ
Sbjct: 309 GGSGVKRECAGTGVFLPRRYGNPPDPKKKSGCSTVLLPAKVVQA-LNLNFDDMDISGLAQ 367

Query: 324 ARFLDGVT--PNHDVMVMRRNAVLAQQWRNGVXXXXXXXXXXXYDMHLPQEWSY 479
            R  +  +    +D ++ RRNA+LAQQ RN              ++ LPQEW+Y
Sbjct: 368 PRLNNNASFHSEYDALMARRNALLAQQKRN-----LRQENVLNREIRLPQEWTY 416


>ref|XP_002530394.1| conserved hypothetical protein [Ricinus communis]
           gi|223530043|gb|EEF31964.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 434

 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 60/164 (36%), Positives = 85/164 (51%), Gaps = 8/164 (4%)
 Frame = +3

Query: 12  GSENGCGFTRNV---RCANPQDLINVNGFVGNNCSLFSG-GRKNVLGSGGGCV--KRKCA 173
           G ENG G  R +   + A P   +  N          SG G + VL  G   V  K++CA
Sbjct: 278 GCENGVGCVRPLGLPQSAWPPLQVQSNQHQNYQQHHHSGSGMRAVLLGGSNSVNNKKECA 337

Query: 174 GTGVFLPRR--SPDPVDSRVKSGCSTGFTQQRAGQVMINMNHDNLMNHAEAQARFLDGVT 347
           GTGVFLPRR  +  P +S+ KS CST     +  Q + N+N +++  HA  Q R   G  
Sbjct: 338 GTGVFLPRRYGNNSPSESKKKSACSTVLLPAKVVQAL-NLNFEDMNGHA--QPRSNTGFA 394

Query: 348 PNHDVMVMRRNAVLAQQWRNGVXXXXXXXXXXXYDMHLPQEWSY 479
            ++D+++ RRNA+LAQQ RN             +++ LPQEW+Y
Sbjct: 395 SDYDMLMARRNAILAQQKRN----LRHDGVVLNHEVRLPQEWTY 434


Top