BLASTX nr result
ID: Cnidium21_contig00028844
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00028844 (639 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270166.1| PREDICTED: upstream activation factor subuni... 131 9e-29 ref|XP_002523973.1| brg-1 associated factor, putative [Ricinus c... 130 3e-28 gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense] 123 3e-26 ref|XP_003517103.1| PREDICTED: upstream activation factor subuni... 120 3e-25 ref|XP_003537709.1| PREDICTED: upstream activation factor subuni... 119 6e-25 >ref|XP_002270166.1| PREDICTED: upstream activation factor subunit spp27 [Vitis vinifera] gi|147798865|emb|CAN68050.1| hypothetical protein VITISV_015104 [Vitis vinifera] gi|296090194|emb|CBI40013.3| unnamed protein product [Vitis vinifera] Length = 128 Score = 131 bits (330), Expect = 9e-29 Identities = 59/85 (69%), Positives = 71/85 (83%) Frame = +3 Query: 195 GPKKLTGILKPMPISPALSEFVGAPESSRTEAVKKIWEHIKANNLQNPANKRVIFCDEKL 374 GP + GI KP+P+SPAL +F+G PE+SR EAVKKIWEHIK NNLQNP NKR I CDEKL Sbjct: 42 GPPRSGGITKPVPVSPALRKFLGVPEASRAEAVKKIWEHIKLNNLQNPTNKREILCDEKL 101 Query: 375 KTILDGKDQVGFMEIAKLLSKHFVK 449 K++ +GKD+VGF+EI KLLS HF+K Sbjct: 102 KSVFEGKDKVGFLEIGKLLSHHFIK 126 >ref|XP_002523973.1| brg-1 associated factor, putative [Ricinus communis] gi|223536700|gb|EEF38341.1| brg-1 associated factor, putative [Ricinus communis] Length = 134 Score = 130 bits (326), Expect = 3e-28 Identities = 61/86 (70%), Positives = 74/86 (86%), Gaps = 1/86 (1%) Frame = +3 Query: 198 PKKLTGILKPMPISPALSEFVGA-PESSRTEAVKKIWEHIKANNLQNPANKRVIFCDEKL 374 P + TGILK P+SPALSEF+G PE+SRT+ VKKIW+HIK +NLQNP NK+ IFCDEKL Sbjct: 48 PVRATGILKAAPVSPALSEFLGGVPEASRTDVVKKIWDHIKLHNLQNPTNKKEIFCDEKL 107 Query: 375 KTILDGKDQVGFMEIAKLLSKHFVKA 452 KTI DGK++VGF+EI KLLS+HFVK+ Sbjct: 108 KTIFDGKEKVGFLEIGKLLSRHFVKS 133 >gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense] Length = 148 Score = 123 bits (309), Expect = 3e-26 Identities = 61/87 (70%), Positives = 70/87 (80%) Frame = +3 Query: 195 GPKKLTGILKPMPISPALSEFVGAPESSRTEAVKKIWEHIKANNLQNPANKRVIFCDEKL 374 G + GILKP PISPAL +FVG E SRT+AVKKIW++IK NNLQNPANK+ I CD+ L Sbjct: 62 GKGRSKGILKPQPISPALQKFVGTSEISRTDAVKKIWDYIKTNNLQNPANKKEINCDDML 121 Query: 375 KTILDGKDQVGFMEIAKLLSKHFVKAS 455 KTI GKD+VGF+EIAKLLS HF KAS Sbjct: 122 KTIFAGKDKVGFLEIAKLLSFHFQKAS 148 >ref|XP_003517103.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine max] Length = 132 Score = 120 bits (300), Expect = 3e-25 Identities = 56/81 (69%), Positives = 68/81 (83%) Frame = +3 Query: 210 TGILKPMPISPALSEFVGAPESSRTEAVKKIWEHIKANNLQNPANKRVIFCDEKLKTILD 389 +GI K +P+S L +F+GAP+ SRTEAVKK+W +IK NLQNPANK+ IFCDEKLKTI + Sbjct: 51 SGIQKVVPVSSELGDFLGAPQVSRTEAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFE 110 Query: 390 GKDQVGFMEIAKLLSKHFVKA 452 GKD+VGF EIAKLLS HFVK+ Sbjct: 111 GKDKVGFTEIAKLLSNHFVKS 131 >ref|XP_003537709.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine max] Length = 132 Score = 119 bits (297), Expect = 6e-25 Identities = 55/81 (67%), Positives = 68/81 (83%) Frame = +3 Query: 210 TGILKPMPISPALSEFVGAPESSRTEAVKKIWEHIKANNLQNPANKRVIFCDEKLKTILD 389 +GI K +P+S L +F+GAP+ SRT+AVKK+W +IK NLQNPANK+ IFCDEKLKTI + Sbjct: 51 SGIQKVVPVSSELGDFLGAPQVSRTDAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFE 110 Query: 390 GKDQVGFMEIAKLLSKHFVKA 452 GKD+VGF EIAKLLS HFVK+ Sbjct: 111 GKDKVGFTEIAKLLSSHFVKS 131