BLASTX nr result

ID: Cnidium21_contig00028819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028819
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_002300839.1| f-box family protein [Populus trichocarpa] g...   167   6e-40
ref|XP_002520729.1| conserved hypothetical protein [Ricinus comm...   167   8e-40
ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif...   166   2e-39
emb|CBI28700.3| unnamed protein product [Vitis vinifera]              166   2e-39

>ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|222857036|gb|EEE94583.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/107 (76%), Positives = 94/107 (87%)
 Frame = +3

Query: 3   MIERALKLGSVLLEAGKRSARKRDYFHNAVVWPLPADLTIKVFSMLDTQSVCYAAAACSF 182
           +I+RALKLGS+LLEAG RSARKR  FHN++ W LP DLTIK+FSMLD QS+CYAAA CS 
Sbjct: 77  LIDRALKLGSLLLEAGNRSARKRSSFHNSLTWALPPDLTIKLFSMLDAQSLCYAAATCSM 136

Query: 183 FRKCASDPLCYASIDLITLIPKVNNMVVSTMIQRAGKALRSLKLGLM 323
           F KCA DPLCYA+IDL T++PKVNN VVSTMIQRAGKALRSLKLG++
Sbjct: 137 FYKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKALRSLKLGIV 183


>ref|XP_002300839.1| f-box family protein [Populus trichocarpa]
           gi|222842565|gb|EEE80112.1| f-box family protein
           [Populus trichocarpa]
          Length = 471

 Score =  167 bits (424), Expect = 6e-40
 Identities = 82/107 (76%), Positives = 93/107 (86%)
 Frame = +3

Query: 3   MIERALKLGSVLLEAGKRSARKRDYFHNAVVWPLPADLTIKVFSMLDTQSVCYAAAACSF 182
           +I+RALKLGS+LLEAGKRSARKR   HN++ W LP DLTIKV SMLDTQS+CYAAA CS 
Sbjct: 62  LIDRALKLGSLLLEAGKRSARKRSSVHNSLTWALPPDLTIKVLSMLDTQSLCYAAATCSM 121

Query: 183 FRKCASDPLCYASIDLITLIPKVNNMVVSTMIQRAGKALRSLKLGLM 323
           F KCA DPLCYA+IDL T++PKVNN VVSTMIQRAGKAL SLKLG++
Sbjct: 122 FYKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKALLSLKLGIV 168


>ref|XP_002520729.1| conserved hypothetical protein [Ricinus communis]
           gi|223540114|gb|EEF41691.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 515

 Score =  167 bits (423), Expect = 8e-40
 Identities = 80/107 (74%), Positives = 94/107 (87%)
 Frame = +3

Query: 3   MIERALKLGSVLLEAGKRSARKRDYFHNAVVWPLPADLTIKVFSMLDTQSVCYAAAACSF 182
           +I+RALKLGS+LLEAG RS+RKR   HN++ W LP DLTIKVFSMLDTQS+CYAAA CS 
Sbjct: 72  LIDRALKLGSILLEAGNRSSRKRSSKHNSLTWVLPPDLTIKVFSMLDTQSLCYAAATCSM 131

Query: 183 FRKCASDPLCYASIDLITLIPKVNNMVVSTMIQRAGKALRSLKLGLM 323
           F KCA DPLCYA+IDL T++PKVNN VVSTMIQRAGK+L+SLKLG++
Sbjct: 132 FHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKSLQSLKLGIV 178


>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
          Length = 486

 Score =  166 bits (419), Expect = 2e-39
 Identities = 79/107 (73%), Positives = 92/107 (85%)
 Frame = +3

Query: 3   MIERALKLGSVLLEAGKRSARKRDYFHNAVVWPLPADLTIKVFSMLDTQSVCYAAAACSF 182
           +I+RAL+LGS LLEAGKRSARKR   HN++ W LP DLTIKVFSMLDTQS+CY AA CS 
Sbjct: 78  LIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSM 137

Query: 183 FRKCASDPLCYASIDLITLIPKVNNMVVSTMIQRAGKALRSLKLGLM 323
           F KCA DPLCYA+IDL T++PKVNN VVSTMIQRAGK L+SL+LG++
Sbjct: 138 FHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGIV 184


>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  166 bits (419), Expect = 2e-39
 Identities = 79/107 (73%), Positives = 92/107 (85%)
 Frame = +3

Query: 3   MIERALKLGSVLLEAGKRSARKRDYFHNAVVWPLPADLTIKVFSMLDTQSVCYAAAACSF 182
           +I+RAL+LGS LLEAGKRSARKR   HN++ W LP DLTIKVFSMLDTQS+CY AA CS 
Sbjct: 78  LIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSM 137

Query: 183 FRKCASDPLCYASIDLITLIPKVNNMVVSTMIQRAGKALRSLKLGLM 323
           F KCA DPLCYA+IDL T++PKVNN VVSTMIQRAGK L+SL+LG++
Sbjct: 138 FHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGIV 184


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