BLASTX nr result

ID: Cnidium21_contig00028807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028807
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521556.1| auxilin, putative [Ricinus communis] gi|2235...   103   1e-20
ref|XP_002327792.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
emb|CBI17489.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_002266275.1| PREDICTED: uncharacterized protein LOC100244...    86   2e-15
ref|NP_195370.5| chaperone DnaJ-domain containing protein [Arabi...    84   9e-15

>ref|XP_002521556.1| auxilin, putative [Ricinus communis] gi|223539234|gb|EEF40827.1|
           auxilin, putative [Ricinus communis]
          Length = 1551

 Score =  103 bits (258), Expect = 1e-20
 Identities = 58/91 (63%), Positives = 64/91 (70%), Gaps = 5/91 (5%)
 Frame = -1

Query: 263 METISHS-----LPKKAYRGSTVKTAYDDVFTAHPKLKVPTLSPRDEDYSEIFEVFHASR 99
           ME  SHS     L KK+  GS+ K+ YDDVF   P+   PTLSPR EDYSEIF  FH+S 
Sbjct: 1   MENPSHSRQPNMLSKKSCNGSSNKSIYDDVFGGPPRFGAPTLSPRVEDYSEIFGGFHSST 60

Query: 98  GSSIPVLDLPAVEDNDEIDVCFDVRSSGFDY 6
           GSSIPVLDLP V+D D  DV FDVRSSGFDY
Sbjct: 61  GSSIPVLDLPLVDD-DAADVFFDVRSSGFDY 90


>ref|XP_002327792.1| predicted protein [Populus trichocarpa] gi|222836877|gb|EEE75270.1|
           predicted protein [Populus trichocarpa]
          Length = 1462

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 55/95 (57%), Positives = 63/95 (66%), Gaps = 9/95 (9%)
 Frame = -1

Query: 263 METISHS-----LPKKAYRGSTVKTAYDDVFTAHPKL-KVPTLSPRDEDYSEIFEVFHAS 102
           ME ++HS     L KK +   + KT YDDVF+A P+    PTLSPR EDY EIF  FHA 
Sbjct: 1   MENLTHSQHPNMLSKKPFTNPS-KTVYDDVFSAPPRFGAAPTLSPRVEDYGEIFGAFHAP 59

Query: 101 RG--SSIPVLDLPAVEDNDEIDVCFDVRS-SGFDY 6
           RG  SSIPVLDLP V++    DV FDVRS SGFDY
Sbjct: 60  RGASSSIPVLDLPLVDNEAAEDVFFDVRSCSGFDY 94


>emb|CBI17489.3| unnamed protein product [Vitis vinifera]
          Length = 1455

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/89 (58%), Positives = 59/89 (66%), Gaps = 9/89 (10%)
 Frame = -1

Query: 263 METISHS-------LPKKAYRGS--TVKTAYDDVFTAHPKLKVPTLSPRDEDYSEIFEVF 111
           ME  SHS       L KK   G+  + ++AYDDVF   PK  VPT+SPR EDY+EIF  F
Sbjct: 1   MEKFSHSRNQTSSALSKKICNGNGFSDRSAYDDVFGGPPKFGVPTISPRVEDYTEIFGSF 60

Query: 110 HASRGSSIPVLDLPAVEDNDEIDVCFDVR 24
           HASR SSIPVLDLPAV   DE DV FDV+
Sbjct: 61  HASRASSIPVLDLPAV---DEADVFFDVQ 86


>ref|XP_002266275.1| PREDICTED: uncharacterized protein LOC100244517 [Vitis vinifera]
          Length = 1458

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/89 (58%), Positives = 59/89 (66%), Gaps = 9/89 (10%)
 Frame = -1

Query: 263 METISHS-------LPKKAYRGS--TVKTAYDDVFTAHPKLKVPTLSPRDEDYSEIFEVF 111
           ME  SHS       L KK   G+  + ++AYDDVF   PK  VPT+SPR EDY+EIF  F
Sbjct: 1   MEKFSHSRNQTSSALSKKICNGNGFSDRSAYDDVFGGPPKFGVPTISPRVEDYTEIFGSF 60

Query: 110 HASRGSSIPVLDLPAVEDNDEIDVCFDVR 24
           HASR SSIPVLDLPAV   DE DV FDV+
Sbjct: 61  HASRASSIPVLDLPAV---DEADVFFDVQ 86


>ref|NP_195370.5| chaperone DnaJ-domain containing protein [Arabidopsis thaliana]
           gi|332661266|gb|AEE86666.1| chaperone DnaJ-domain
           containing protein [Arabidopsis thaliana]
          Length = 1422

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 55/113 (48%), Positives = 60/113 (53%), Gaps = 27/113 (23%)
 Frame = -1

Query: 263 METISHS--------LPKKAYRGS----------------TVKTAYDDVFTAHPKLKVPT 156
           ME +SHS        LPKK Y G+                T  T YDDVF   P+   PT
Sbjct: 1   MENLSHSRNPNRSSSLPKKPYNGNNTTGGFSYNSGKTANTTTTTTYDDVFGGPPRFGAPT 60

Query: 155 LSPRDEDYSEIFEVFHASRG---SSIPVLDLPAVEDNDEIDVCFDVRSSGFDY 6
           LSPR EDY EIF  F+ S     SSIPVLDLP V+D D   V FDVRS GFDY
Sbjct: 61  LSPRLEDYCEIFSGFNGSSRAAVSSIPVLDLPLVDDRD---VYFDVRSQGFDY 110


Top