BLASTX nr result

ID: Cnidium21_contig00028803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028803
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628791.1| Transcription factor bHLH96 [Medicago trunca...    47   2e-06
ref|XP_002278824.1| PREDICTED: transcription factor bHLH71 [Viti...    43   3e-06
emb|CBI33874.3| unnamed protein product [Vitis vinifera]               43   3e-06
emb|CBI83256.1| basic helix-loop-helix transcription factor [Hum...    44   6e-06
ref|XP_002326728.1| predicted protein [Populus trichocarpa] gi|2...    43   6e-06

>ref|XP_003628791.1| Transcription factor bHLH96 [Medicago truncatula]
           gi|355522813|gb|AET03267.1| Transcription factor bHLH96
           [Medicago truncatula]
          Length = 312

 Score = 46.6 bits (109), Expect(2) = 2e-06
 Identities = 26/51 (50%), Positives = 34/51 (66%)
 Frame = +1

Query: 49  QTLNRNYTCTATSGAIADIEVTLVETHANIRVXXXXXXXXXXKLISGFRNL 201
           QT N+ YT + T  AIADIEVTL+ETHAN+R+          KL++GF+ L
Sbjct: 208 QTPNK-YT-SKTKAAIADIEVTLIETHANLRILTRTRPGQLTKLVAGFQRL 256



 Score = 29.6 bits (65), Expect(2) = 2e-06
 Identities = 12/22 (54%), Positives = 19/22 (86%)
 Frame = +2

Query: 197 TFLHLSVTSMETIVLYSISSKV 262
           + LHL+VT+++ +V YSIS+KV
Sbjct: 259 SILHLNVTTIQPLVFYSISAKV 280


>ref|XP_002278824.1| PREDICTED: transcription factor bHLH71 [Vitis vinifera]
          Length = 315

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = +1

Query: 64  NYTCTATSGAIADIEVTLVETHANIRVXXXXXXXXXXKLISGFRNL 201
           N   + +  A+ADIEVTL+ETHAN+R+          K+++GF+ L
Sbjct: 215 NKYTSKSKAAVADIEVTLIETHANLRILSHKSPRLLSKMVTGFQTL 260



 Score = 32.7 bits (73), Expect(2) = 3e-06
 Identities = 14/22 (63%), Positives = 20/22 (90%)
 Frame = +2

Query: 197 TFLHLSVTSMETIVLYSISSKV 262
           T LHL+VT+++ +VLYSIS+KV
Sbjct: 263 TILHLNVTTVDPLVLYSISAKV 284


>emb|CBI33874.3| unnamed protein product [Vitis vinifera]
          Length = 166

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = +1

Query: 64  NYTCTATSGAIADIEVTLVETHANIRVXXXXXXXXXXKLISGFRNL 201
           N   + +  A+ADIEVTL+ETHAN+R+          K+++GF+ L
Sbjct: 66  NKYTSKSKAAVADIEVTLIETHANLRILSHKSPRLLSKMVTGFQTL 111



 Score = 32.7 bits (73), Expect(2) = 3e-06
 Identities = 14/22 (63%), Positives = 20/22 (90%)
 Frame = +2

Query: 197 TFLHLSVTSMETIVLYSISSKV 262
           T LHL+VT+++ +VLYSIS+KV
Sbjct: 114 TILHLNVTTVDPLVLYSISAKV 135


>emb|CBI83256.1| basic helix-loop-helix transcription factor [Humulus lupulus]
          Length = 318

 Score = 44.3 bits (103), Expect(2) = 6e-06
 Identities = 22/49 (44%), Positives = 33/49 (67%)
 Frame = +1

Query: 55  LNRNYTCTATSGAIADIEVTLVETHANIRVXXXXXXXXXXKLISGFRNL 201
           ++  YT + T  AIADIEVTL+ETHA++R+          +LI+GF++L
Sbjct: 214 ISNKYT-SKTKAAIADIEVTLIETHASLRIFTRRSPRQLSRLIAGFQSL 261



 Score = 30.4 bits (67), Expect(2) = 6e-06
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +2

Query: 197 TFLHLSVTSMETIVLYSISSKV 262
           T LHL+VT++  +VLYS+S KV
Sbjct: 264 TVLHLNVTTLNPLVLYSVSVKV 285


>ref|XP_002326728.1| predicted protein [Populus trichocarpa] gi|222834050|gb|EEE72527.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 42.7 bits (99), Expect(2) = 6e-06
 Identities = 20/46 (43%), Positives = 28/46 (60%)
 Frame = +1

Query: 64  NYTCTATSGAIADIEVTLVETHANIRVXXXXXXXXXXKLISGFRNL 201
           N   + T  +IADIEV L+ETHAN+R+          KL++GF+ L
Sbjct: 142 NKFTSKTKASIADIEVNLIETHANLRILSRRSPRQLSKLVAGFQTL 187



 Score = 32.0 bits (71), Expect(2) = 6e-06
 Identities = 13/22 (59%), Positives = 20/22 (90%)
 Frame = +2

Query: 197 TFLHLSVTSMETIVLYSISSKV 262
           T LH++VT+M+ +VLYSIS+K+
Sbjct: 190 TVLHINVTTMDPLVLYSISAKL 211


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