BLASTX nr result

ID: Cnidium21_contig00028799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028799
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529271.1| Single-stranded DNA-binding protein, mitocho...   117   7e-25
ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding prote...   116   2e-24
ref|NP_001237927.1| uncharacterized protein LOC100306124 [Glycin...   114   1e-23
ref|XP_003591190.1| Single-stranded DNA-binding protein [Medicag...   109   3e-22
gb|ABD28355.2| Single-stranded DNA binding [Medicago truncatula]      109   3e-22

>ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor,
           putative [Ricinus communis] gi|223531260|gb|EEF33103.1|
           Single-stranded DNA-binding protein, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 213

 Score =  117 bits (294), Expect = 7e-25
 Identities = 63/112 (56%), Positives = 76/112 (67%), Gaps = 9/112 (8%)
 Frame = +2

Query: 2   MSSLALRIAKHLNISVFTKTHFPFVAGSSR----MYSTASSDTDNDIDA-----DKVDDF 154
           MSSLA++ AK L +S    T    V G  R    +YST S   +ND+       ++ DDF
Sbjct: 1   MSSLAVKFAKFLRVSSPAATTSSPVVGLQRSFKTLYSTESFSGENDVGKNNELDEEFDDF 60

Query: 155 FPQKQELELQGVDPQKGWGFRGVHKAIICGKIGNVPVQKILRNGRAVTIFTV 310
             +K EL++QGVDP+KGWGFRGVHKAIICGK+G  PVQKILRNGR VTIFTV
Sbjct: 61  LGEKPELQIQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTV 112


>ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
           [Glycine max]
          Length = 217

 Score =  116 bits (291), Expect = 2e-24
 Identities = 65/116 (56%), Positives = 78/116 (67%), Gaps = 13/116 (11%)
 Frame = +2

Query: 2   MSSLALRIAKHLNISVFTKTHFPFVAGS-SRMYSTASSDTDNDI-----DADK------- 142
           M+S+A+R+AKHL +S  T      V  S +  YST+ S  +ND      DA K       
Sbjct: 1   MNSMAVRLAKHLRLSALTSFSLGGVPRSGASWYSTSLSGGENDHPLPDNDAPKKEALDEE 60

Query: 143 VDDFFPQKQELELQGVDPQKGWGFRGVHKAIICGKIGNVPVQKILRNGRAVTIFTV 310
            DDF  +K EL+LQGVDP+KGWGFRGVHKAIICGK+G  PVQKILRNGR +TIFTV
Sbjct: 61  FDDFLGEKPELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNITIFTV 116


>ref|NP_001237927.1| uncharacterized protein LOC100306124 [Glycine max]
           gi|255627623|gb|ACU14156.1| unknown [Glycine max]
          Length = 236

 Score =  114 bits (284), Expect = 1e-23
 Identities = 62/115 (53%), Positives = 76/115 (66%), Gaps = 12/115 (10%)
 Frame = +2

Query: 2   MSSLALRIAKHLNISVFTKTHFPFVAGS-SRMYSTASSDTDNDIDADKV----------- 145
           M+S+A+R+ KHL +S  T + F  V  S +  YST+ S  +     D V           
Sbjct: 1   MNSMAVRLVKHLQLSAPTSSSFGGVPRSGASWYSTSLSGGEYQPSQDNVAPKNEALDGEL 60

Query: 146 DDFFPQKQELELQGVDPQKGWGFRGVHKAIICGKIGNVPVQKILRNGRAVTIFTV 310
           DDF  +K EL+LQGVDP+KGWGFRGVHKAIICGK+G  PVQKILRNGR +TIFTV
Sbjct: 61  DDFLGEKAELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNLTIFTV 115


>ref|XP_003591190.1| Single-stranded DNA-binding protein [Medicago truncatula]
           gi|355480238|gb|AES61441.1| Single-stranded DNA-binding
           protein [Medicago truncatula]
           gi|388493454|gb|AFK34793.1| unknown [Medicago
           truncatula]
          Length = 212

 Score =  109 bits (272), Expect = 3e-22
 Identities = 60/116 (51%), Positives = 76/116 (65%), Gaps = 13/116 (11%)
 Frame = +2

Query: 2   MSSLALRIAKHLNISVFTKTHFPFVAGSSRMYSTASSDTD-------------NDIDADK 142
           M+S+ALR++KHL  S    +H      +   YST +S+TD              ++D D+
Sbjct: 1   MNSVALRLSKHLRRS----SHASVPRSTVLCYSTFTSETDAGQPSRDNNGLNKEELD-DE 55

Query: 143 VDDFFPQKQELELQGVDPQKGWGFRGVHKAIICGKIGNVPVQKILRNGRAVTIFTV 310
            DDF   + EL+LQGVDP +GWGFRGVHKAIICGK+G  PVQKILRNG+ VTIFTV
Sbjct: 56  FDDFLGGRPELQLQGVDPSRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTV 111


>gb|ABD28355.2| Single-stranded DNA binding [Medicago truncatula]
          Length = 216

 Score =  109 bits (272), Expect = 3e-22
 Identities = 60/116 (51%), Positives = 76/116 (65%), Gaps = 13/116 (11%)
 Frame = +2

Query: 2   MSSLALRIAKHLNISVFTKTHFPFVAGSSRMYSTASSDTD-------------NDIDADK 142
           M+S+ALR++KHL  S    +H      +   YST +S+TD              ++D D+
Sbjct: 1   MNSVALRLSKHLRRS----SHASVPRSTVLCYSTFTSETDAGQPSRDNNGLNKEELD-DE 55

Query: 143 VDDFFPQKQELELQGVDPQKGWGFRGVHKAIICGKIGNVPVQKILRNGRAVTIFTV 310
            DDF   + EL+LQGVDP +GWGFRGVHKAIICGK+G  PVQKILRNG+ VTIFTV
Sbjct: 56  FDDFLGGRPELQLQGVDPSRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTV 111


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