BLASTX nr result

ID: Cnidium21_contig00028790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028790
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05323.1| putative starch branching enzyme [Populus trichoc...    48   4e-08
ref|XP_002300340.1| predicted protein [Populus trichocarpa] gi|2...    48   5e-08
ref|XP_003634716.1| PREDICTED: 1,4-alpha-glucan-branching enzyme...    44   7e-08
ref|XP_003634715.1| PREDICTED: 1,4-alpha-glucan-branching enzyme...    44   7e-08
ref|XP_002278858.1| PREDICTED: 1,4-alpha-glucan-branching enzyme...    44   7e-08

>gb|ABN05323.1| putative starch branching enzyme [Populus trichocarpa]
          Length = 896

 Score = 48.1 bits (113), Expect(2) = 4e-08
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = +2

Query: 5   FLLSNFNWWLEEYHMDGFQFH 67
           +LLSN NWW+EEYH+DGFQFH
Sbjct: 535 YLLSNLNWWVEEYHIDGFQFH 555



 Score = 33.9 bits (76), Expect(2) = 4e-08
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +1

Query: 88  THNGYASFTGDAEEYC 135
           THNG+ASFTG+ E+YC
Sbjct: 563 THNGFASFTGNLEDYC 578


>ref|XP_002300340.1| predicted protein [Populus trichocarpa] gi|222847598|gb|EEE85145.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score = 48.1 bits (113), Expect(2) = 5e-08
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = +2

Query: 5   FLLSNFNWWLEEYHMDGFQFH 67
           +LLSN NWW+EEYH+DGFQFH
Sbjct: 41  YLLSNLNWWVEEYHIDGFQFH 61



 Score = 33.9 bits (76), Expect(2) = 5e-08
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +1

Query: 88  THNGYASFTGDAEEYC 135
           THNG+ASFTG+ E+YC
Sbjct: 69  THNGFASFTGNLEDYC 84


>ref|XP_003634716.1| PREDICTED: 1,4-alpha-glucan-branching enzyme-like isoform 3 [Vitis
           vinifera]
          Length = 897

 Score = 44.3 bits (103), Expect(2) = 7e-08
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = +2

Query: 2   YFLLSNFNWWLEEYHMDGFQFH 67
           +FLLSN NWW+ EY +DGFQFH
Sbjct: 542 HFLLSNLNWWVVEYQIDGFQFH 563



 Score = 37.0 bits (84), Expect(2) = 7e-08
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +1

Query: 88  THNGYASFTGDAEEYC 135
           THNG+ASFTGD EEYC
Sbjct: 571 THNGFASFTGDLEEYC 586


>ref|XP_003634715.1| PREDICTED: 1,4-alpha-glucan-branching enzyme-like isoform 2 [Vitis
           vinifera] gi|297737471|emb|CBI26672.3| unnamed protein
           product [Vitis vinifera]
          Length = 896

 Score = 44.3 bits (103), Expect(2) = 7e-08
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = +2

Query: 2   YFLLSNFNWWLEEYHMDGFQFH 67
           +FLLSN NWW+ EY +DGFQFH
Sbjct: 534 HFLLSNLNWWVVEYQIDGFQFH 555



 Score = 37.0 bits (84), Expect(2) = 7e-08
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +1

Query: 88  THNGYASFTGDAEEYC 135
           THNG+ASFTGD EEYC
Sbjct: 563 THNGFASFTGDLEEYC 578


>ref|XP_002278858.1| PREDICTED: 1,4-alpha-glucan-branching enzyme-like isoform 1 [Vitis
           vinifera]
          Length = 866

 Score = 44.3 bits (103), Expect(2) = 7e-08
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = +2

Query: 2   YFLLSNFNWWLEEYHMDGFQFH 67
           +FLLSN NWW+ EY +DGFQFH
Sbjct: 504 HFLLSNLNWWVVEYQIDGFQFH 525



 Score = 37.0 bits (84), Expect(2) = 7e-08
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +1

Query: 88  THNGYASFTGDAEEYC 135
           THNG+ASFTGD EEYC
Sbjct: 533 THNGFASFTGDLEEYC 548


Top