BLASTX nr result

ID: Cnidium21_contig00028783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028783
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307568.1| tir-nbs-lrr resistance protein [Populus tric...    62   3e-15
gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Popu...    50   3e-13
ref|NP_001237766.1| functional candidate resistance protein KR1 ...    55   4e-12
ref|XP_003553345.1| PREDICTED: TMV resistance protein N-like [Gl...    55   6e-12
gb|ACF21991.1| NBS-coding resistance gene protein [Nicotiana tab...    55   1e-11

>ref|XP_002307568.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222857017|gb|EEE94564.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 541

 Score = 62.0 bits (149), Expect(2) = 3e-15
 Identities = 28/47 (59%), Positives = 37/47 (78%)
 Frame = +2

Query: 191 KTTLAKAVYNQNYKHFQGSCFLENVREVSRKKGLECLQQQLINDVLK 331
           KTT+AK VYN  +  F+GSCFLENVR+ S  KG+ CLQ+QL+++ LK
Sbjct: 225 KTTVAKKVYNLVFHEFEGSCFLENVRKESISKGIACLQRQLLSETLK 271



 Score = 44.3 bits (103), Expect(2) = 3e-15
 Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 7/47 (14%)
 Frame = +3

Query: 3   VARYPVGLISRVKDITALL-------KIYSVVGMGGLGKTSLAEKIF 122
           V  +PVGL+SR K++ +LL       +I  + GMGG+GKT++A+K++
Sbjct: 187 VTTHPVGLLSRAKEVISLLGEKLVDVRIVGIYGMGGIGKTTVAKKVY 233


>gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1139

 Score = 50.1 bits (118), Expect(2) = 3e-13
 Identities = 24/48 (50%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
 Frame = +2

Query: 191 KTTLAKAVYNQNYKHFQGSCFLENVREVSRK-KGLECLQQQLINDVLK 331
           KTT+AKAV+N+    F+GSC L N++E+S +  GL  LQ+QLI+D+++
Sbjct: 415 KTTIAKAVFNELCNEFEGSCCLLNIKEISEQPSGLVQLQEQLISDLIQ 462



 Score = 49.3 bits (116), Expect(2) = 3e-13
 Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 7/47 (14%)
 Frame = +3

Query: 3   VARYPVGLISRVKDITALLKIYS-------VVGMGGLGKTSLAEKIF 122
           VA YPVG+ SRVKD+ ++L +Y+       + GMGG+GKT++A+ +F
Sbjct: 377 VASYPVGIDSRVKDVVSMLSVYTDDVRTVGIYGMGGIGKTTIAKAVF 423


>ref|NP_001237766.1| functional candidate resistance protein KR1 [Glycine max]
           gi|18033111|gb|AAL56987.1|AF327903_1 functional
           candidate resistance protein KR1 [Glycine max]
          Length = 1124

 Score = 55.1 bits (131), Expect(2) = 4e-12
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = +2

Query: 191 KTTLAKAVYNQNYKHFQGSCFLENVREVSRKKGLECLQQQLINDV 325
           KTTLA AVYN    HF+  CFL+NVRE S+K GL+ LQ+ L++++
Sbjct: 231 KTTLAAAVYNSIADHFEALCFLQNVRETSKKHGLQHLQRNLLSEM 275



 Score = 40.8 bits (94), Expect(2) = 4e-12
 Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 8/48 (16%)
 Frame = +3

Query: 3   VARYPVGLISRVKDITALLKIYS--------VVGMGGLGKTSLAEKIF 122
           VA YPVGL SR++++ ALL + S        + G+GG+GKT+LA  ++
Sbjct: 192 VADYPVGLESRIQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVY 239


>ref|XP_003553345.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1082

 Score = 55.1 bits (131), Expect(2) = 6e-12
 Identities = 25/46 (54%), Positives = 33/46 (71%)
 Frame = +2

Query: 191 KTTLAKAVYNQNYKHFQGSCFLENVREVSRKKGLECLQQQLINDVL 328
           KTTLA AVYN    HF+  CFLENVRE S+K G++ LQ  L+++ +
Sbjct: 235 KTTLAAAVYNSIADHFEALCFLENVRETSKKHGIQHLQSNLLSETV 280



 Score = 40.0 bits (92), Expect(2) = 6e-12
 Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 8/48 (16%)
 Frame = +3

Query: 3   VARYPVGLISRVKDITALLKIYS--------VVGMGGLGKTSLAEKIF 122
           VA YPVGL SR++++ ALL + S        + G+GG+GKT+LA  ++
Sbjct: 196 VADYPVGLESRMQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVY 243


>gb|ACF21991.1| NBS-coding resistance gene protein [Nicotiana tabacum]
          Length = 294

 Score = 54.7 bits (130), Expect(2) = 1e-11
 Identities = 25/47 (53%), Positives = 35/47 (74%)
 Frame = +2

Query: 191 KTTLAKAVYNQNYKHFQGSCFLENVREVSRKKGLECLQQQLINDVLK 331
           KTTLAKA+YN+ ++HF  SCFL +VR  + + GL  LQ++L+  VLK
Sbjct: 73  KTTLAKAMYNRMFRHFDSSCFLSDVRSEAEEFGLVKLQEKLLQQVLK 119



 Score = 39.7 bits (91), Expect(2) = 1e-11
 Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 8/48 (16%)
 Frame = +3

Query: 3   VARYPVGLISRVKDITALLKI--------YSVVGMGGLGKTSLAEKIF 122
           VA +PVG+ SRVKDI  LL+I          + G+GG+GKT+LA+ ++
Sbjct: 34  VAWHPVGVDSRVKDIELLLQIECEDEVRMIGIHGVGGIGKTTLAKAMY 81