BLASTX nr result

ID: Cnidium21_contig00028778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028778
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEB71567.1| RTL5-like protein [Solanum chacoense]                   66   3e-09
ref|XP_002520543.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
ref|XP_002314165.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002299860.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_004143126.1| PREDICTED: uncharacterized protein LOC101205...    55   8e-06

>gb|AEB71567.1| RTL5-like protein [Solanum chacoense]
          Length = 109

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 49/133 (36%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
 Frame = +2

Query: 14  MEYYMDEESKLSKHYHDQXXXXXXXXXXXXXXXXXXXXXXXXXTKCSATKSPLLP-SFSH 190
           MEYYMDE+ KLSK   +                            C  +  P LP S+S 
Sbjct: 1   MEYYMDEKWKLSKEDPNNNSYNSSSKSSLRRSYSQH---------CPISSDPPLPRSYSQ 51

Query: 191 KNSNNNLXXXXXXXXXXXXXXXXXXXXXXXXXXXNFTKKCGSMAKEQKAKFYIVKRCITM 370
           K S+++                            NF  KC +MAKEQKAKFYIVKRCI M
Sbjct: 52  KTSSSS---------------KSRLSKSSSQRSSNFKSKCSTMAKEQKAKFYIVKRCIAM 96

Query: 371 LVFWHKH-KHVDS 406
           LV W+KH KH DS
Sbjct: 97  LVRWNKHDKHGDS 109


>ref|XP_002520543.1| conserved hypothetical protein [Ricinus communis]
           gi|223540385|gb|EEF41956.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 103

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
 Frame = +2

Query: 143 TKCSATKSPLL----------PSFSHKNSNNNLXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
           TK S++KSPLL          PS S  +SNNN                            
Sbjct: 22  TKSSSSKSPLLRSSSLKISSSPSSSSSSSNNN--------------NKCPLPRSYSQKSS 67

Query: 293 NFTKKCGSMAKEQKAKFYIVKRCITMLVFWHKH 391
           + ++KC S+AKEQKA+FYI++RC+ MLV WHKH
Sbjct: 68  SISRKCSSLAKEQKARFYIMRRCVAMLVCWHKH 100


>ref|XP_002314165.1| predicted protein [Populus trichocarpa] gi|222850573|gb|EEE88120.1|
           predicted protein [Populus trichocarpa]
          Length = 91

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/83 (38%), Positives = 44/83 (53%)
 Frame = +2

Query: 143 TKCSATKSPLLPSFSHKNSNNNLXXXXXXXXXXXXXXXXXXXXXXXXXXXNFTKKCGSMA 322
           TK S++K+PLL S S K S+                              + ++KC S+A
Sbjct: 22  TKSSSSKAPLLRSSSLKISSPKCPLPRSCSQKSS----------------SISRKCSSLA 65

Query: 323 KEQKAKFYIVKRCITMLVFWHKH 391
           KEQKA+FYI++RC+ MLV WHKH
Sbjct: 66  KEQKARFYIMRRCVAMLVCWHKH 88


>ref|XP_002299860.1| predicted protein [Populus trichocarpa] gi|222847118|gb|EEE84665.1|
           predicted protein [Populus trichocarpa]
          Length = 91

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/82 (39%), Positives = 40/82 (48%)
 Frame = +2

Query: 146 KCSATKSPLLPSFSHKNSNNNLXXXXXXXXXXXXXXXXXXXXXXXXXXXNFTKKCGSMAK 325
           K S+ K PL  SFS KNS+                                + KC S+AK
Sbjct: 38  KSSSPKCPLPRSFSQKNSS-------------------------------ISHKCSSLAK 66

Query: 326 EQKAKFYIVKRCITMLVFWHKH 391
           EQKA+FYI++RC+ MLV WHKH
Sbjct: 67  EQKARFYIMRRCVAMLVCWHKH 88


>ref|XP_004143126.1| PREDICTED: uncharacterized protein LOC101205202 [Cucumis sativus]
           gi|449527915|ref|XP_004170953.1| PREDICTED:
           uncharacterized LOC101205202 [Cucumis sativus]
          Length = 109

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 21/29 (72%), Positives = 26/29 (89%)
 Frame = +2

Query: 305 KCGSMAKEQKAKFYIVKRCITMLVFWHKH 391
           KC S+AKEQKA+FYI++RC+ MLV WHKH
Sbjct: 78  KCSSLAKEQKARFYIMRRCVAMLVCWHKH 106


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