BLASTX nr result

ID: Cnidium21_contig00028725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028725
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633737.1| PREDICTED: uncharacterized protein LOC100853...    85   7e-15
ref|XP_002305861.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
dbj|BAK04392.1| predicted protein [Hordeum vulgare subsp. vulgare]     73   3e-11
ref|XP_003560789.1| PREDICTED: uncharacterized protein LOC100845...    72   6e-11
ref|NP_001143574.1| uncharacterized protein LOC100276272 [Zea ma...    69   3e-10

>ref|XP_003633737.1| PREDICTED: uncharacterized protein LOC100853960 [Vitis vinifera]
          Length = 344

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 51/113 (45%), Positives = 61/113 (53%), Gaps = 26/113 (23%)
 Frame = -3

Query: 263 TDHLNSSSSPVSKLPIKRKN------------------------QISPPDSNSRRDAPNK 156
           T H +  +S   KLPIKRK                            P DS + +  P K
Sbjct: 14  TPHFSPKAS-ARKLPIKRKTPHPSSSTPSPNPNPNLIPKTESTADDDPDDSGNTKTLPFK 72

Query: 155 FHRIWTEPDEILFLQSLVN--SPPLSFPRDLHIFFTRFLNNICRPYSKSQLSE 3
           FHRIWTEPDEI FL+ L++  S  LSFPRDLHIF+ RF   + +PYSKSQLSE
Sbjct: 73  FHRIWTEPDEIRFLRGLLDCSSQDLSFPRDLHIFYARFSQTMSQPYSKSQLSE 125


>ref|XP_002305861.1| predicted protein [Populus trichocarpa] gi|222848825|gb|EEE86372.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 54/123 (43%), Positives = 68/123 (55%), Gaps = 34/123 (27%)
 Frame = -3

Query: 269 PITDHLN---SSSSPVSKLPIKRK----------------------------NQISPPDS 183
           P+  H+    SSSS  SKLPIKRK                            + IS P +
Sbjct: 5   PVPQHIPFKPSSSSSASKLPIKRKTPDSLHHHHLLSPKLETSSTTTPTTTNPDAISTPTT 64

Query: 182 NSR-RDAPNKFHRIWTEPDEILFLQSLVNSPP--LSFPRDLHIFFTRFLNNICRPYSKSQ 12
           NS  +  P KFHRIW+EPDEI FLQ L++S    LSFP+DL  F+ RF N++ +PY+KSQ
Sbjct: 65  NSESKPPPFKFHRIWSEPDEISFLQGLLSSSSQGLSFPKDLPFFYDRFSNSMSQPYTKSQ 124

Query: 11  LSE 3
           LSE
Sbjct: 125 LSE 127


>dbj|BAK04392.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 398

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 19/108 (17%)
 Frame = -3

Query: 269 PITDHLNSSSSPVS---KLPIKRKNQISPPDSNSRRDA--------------PNKFHRIW 141
           P+  H   S SP S   KLPIKR++   P  S S   A              P KF RIW
Sbjct: 28  PLPHHPTPSPSPASAARKLPIKRRSPPRPSSSPSSSGAASSGDPLKAAHQQPPFKFQRIW 87

Query: 140 TEPDEILFLQSLVN--SPPLSFPRDLHIFFTRFLNNICRPYSKSQLSE 3
           +E DE+ FLQ L+   +  L FPRDL++F+ RF  ++ +PY++SQLSE
Sbjct: 88  SESDELRFLQGLLGCGAQGLVFPRDLNVFYDRFSESMPQPYTRSQLSE 135


>ref|XP_003560789.1| PREDICTED: uncharacterized protein LOC100845859 [Brachypodium
           distachyon]
          Length = 372

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 11/99 (11%)
 Frame = -3

Query: 266 ITDHLNSSSSPVSKLPIKRKNQISPPDSNSRR---------DAPNKFHRIWTEPDEILFL 114
           +T   ++S+S   KLP+KR++   P  S S             P KF RIW+E DE+ FL
Sbjct: 33  LTPPASASASAARKLPVKRRSPPRPSSSPSSSGPTAADQDGQPPFKFQRIWSESDELRFL 92

Query: 113 QSLVN--SPPLSFPRDLHIFFTRFLNNICRPYSKSQLSE 3
           Q L+   +  L FPRDL++F+ RF  ++ +PY++SQLSE
Sbjct: 93  QGLLGCGAQGLVFPRDLNVFYDRFSESMPQPYTRSQLSE 131


>ref|NP_001143574.1| uncharacterized protein LOC100276272 [Zea mays]
           gi|195622696|gb|ACG33178.1| hypothetical protein [Zea
           mays]
          Length = 362

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 21/102 (20%)
 Frame = -3

Query: 245 SSSPVSKLPIKRKN---QISPPDSNS----------------RRDAPNKFHRIWTEPDEI 123
           S+S   KLPIKR++     SPP S+S                ++  P KF RIW+E DE+
Sbjct: 30  SASAARKLPIKRRSPRPSSSPPSSSSPASSDPLRAPGGGGSDQQQPPFKFQRIWSESDEL 89

Query: 122 LFLQSLVN--SPPLSFPRDLHIFFTRFLNNICRPYSKSQLSE 3
            FLQ L+   +  L FPRDL++F+ RF  ++ +PY+++QLSE
Sbjct: 90  RFLQGLLGCGTQGLVFPRDLNVFYDRFSESMPQPYTRAQLSE 131


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