BLASTX nr result

ID: Cnidium21_contig00028713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028713
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW61762.1| putative RNA helicase family protein [Zea mays]        472   e-131
gb|EEC83399.1| hypothetical protein OsI_28838 [Oryza sativa Indi...   472   e-131
ref|XP_002457621.1| hypothetical protein SORBIDRAFT_03g010540 [S...   471   e-131
ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor...   471   e-131
ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor...   471   e-131

>gb|AFW61762.1| putative RNA helicase family protein [Zea mays]
          Length = 639

 Score =  472 bits (1214), Expect = e-131
 Identities = 230/277 (83%), Positives = 253/277 (91%)
 Frame = +3

Query: 3    KIAELIICPIYANLPTEMQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDTGFVKI 182
            KI+ELIICPIYANLPTE+QAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID GF KI
Sbjct: 237  KISELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKI 296

Query: 183  KSYNPRTGMESLLVTPISKASANQRAGRSGRTGPGKCFRLYTFHSYSNDMEDNTVPEIQR 362
            KSYNPRTGMESLL+ PISKASANQRAGRSGRTGPGKCFRLYT ++Y +D+EDNTVPEIQR
Sbjct: 297  KSYNPRTGMESLLINPISKASANQRAGRSGRTGPGKCFRLYTSYNYMHDLEDNTVPEIQR 356

Query: 363  TNLANVVLSLKSLGISDVSEFDFMDPPAQECLIQALKLLYALGALNKKGELTKVGRKMAE 542
            TNLANVVL+LKSLGI D+  FDFMDPP  E L++AL+ L+AL ALN +GELTK GR+MAE
Sbjct: 357  TNLANVVLTLKSLGIHDLVNFDFMDPPPSEALLRALEQLFALSALNSRGELTKTGRRMAE 416

Query: 543  FPLDPMLSKMIIASDKYKCSDEIISIAAMLSTGSLIFYRPKKKPVHADNARKLFYTGNVG 722
            FPLDPMLSKMI+AS+KYKCSDEIISIA+MLS G+ IFYRPK K VHADNAR  F+TGNVG
Sbjct: 417  FPLDPMLSKMIVASEKYKCSDEIISIASMLSIGNSIFYRPKDKQVHADNARLNFHTGNVG 476

Query: 723  DHVALLNVYRSWKENDYSHQWCYENYVQVKSMKRARD 833
            DH+ALLNVY SWKE DYS QWCYENY+QV+SMKRARD
Sbjct: 477  DHIALLNVYNSWKETDYSTQWCYENYIQVRSMKRARD 513


>gb|EEC83399.1| hypothetical protein OsI_28838 [Oryza sativa Indica Group]
            gi|222640378|gb|EEE68510.1| hypothetical protein
            OsJ_26936 [Oryza sativa Japonica Group]
          Length = 1046

 Score =  472 bits (1214), Expect = e-131
 Identities = 228/277 (82%), Positives = 253/277 (91%)
 Frame = +3

Query: 3    KIAELIICPIYANLPTEMQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDTGFVKI 182
            KIAEL+ICPIYANLPTE+QAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV+D GF KI
Sbjct: 655  KIAELLICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFCKI 714

Query: 183  KSYNPRTGMESLLVTPISKASANQRAGRSGRTGPGKCFRLYTFHSYSNDMEDNTVPEIQR 362
            KSYNPRTGMESLL+ PISKASANQRAGRSGRTGPGKCFRLYT ++Y +D+EDNTVPEIQR
Sbjct: 715  KSYNPRTGMESLLINPISKASANQRAGRSGRTGPGKCFRLYTSYNYMHDLEDNTVPEIQR 774

Query: 363  TNLANVVLSLKSLGISDVSEFDFMDPPAQECLIQALKLLYALGALNKKGELTKVGRKMAE 542
            TNLANVVL+LKSLGI D+  FDFMDPP  E L++AL+ L+AL ALN +GELTK GR+MAE
Sbjct: 775  TNLANVVLTLKSLGIHDLVNFDFMDPPPSEALLKALEQLFALSALNSRGELTKTGRRMAE 834

Query: 543  FPLDPMLSKMIIASDKYKCSDEIISIAAMLSTGSLIFYRPKKKPVHADNARKLFYTGNVG 722
            FPLDPMLSKMI+AS+KYKCSDE+ISIA+MLS G+ IFYRPK K VHADNAR  F+TGNVG
Sbjct: 835  FPLDPMLSKMIVASEKYKCSDEVISIASMLSVGNSIFYRPKDKQVHADNARLNFHTGNVG 894

Query: 723  DHVALLNVYRSWKENDYSHQWCYENYVQVKSMKRARD 833
            DH+ALLNVY SWKE DYS QWCYENY+QV+SMKRARD
Sbjct: 895  DHIALLNVYNSWKETDYSTQWCYENYIQVRSMKRARD 931


>ref|XP_002457621.1| hypothetical protein SORBIDRAFT_03g010540 [Sorghum bicolor]
            gi|241929596|gb|EES02741.1| hypothetical protein
            SORBIDRAFT_03g010540 [Sorghum bicolor]
          Length = 1046

 Score =  471 bits (1213), Expect = e-131
 Identities = 229/277 (82%), Positives = 253/277 (91%)
 Frame = +3

Query: 3    KIAELIICPIYANLPTEMQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDTGFVKI 182
            KI+ELIICPIYANLPTE+QAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID GF KI
Sbjct: 644  KISELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKI 703

Query: 183  KSYNPRTGMESLLVTPISKASANQRAGRSGRTGPGKCFRLYTFHSYSNDMEDNTVPEIQR 362
            KSYNPRTGMESLL+ PISKASANQRAGRSGRTGPGKCFRLYT ++Y +D+EDNTVPEIQR
Sbjct: 704  KSYNPRTGMESLLINPISKASANQRAGRSGRTGPGKCFRLYTSYNYMHDLEDNTVPEIQR 763

Query: 363  TNLANVVLSLKSLGISDVSEFDFMDPPAQECLIQALKLLYALGALNKKGELTKVGRKMAE 542
            TNLANVVL+LKSLGI D+  FDFMDPP  E L++AL+ L+AL ALN +GELTK GR+MAE
Sbjct: 764  TNLANVVLTLKSLGIHDLVNFDFMDPPPSEALLRALEQLFALSALNSRGELTKTGRRMAE 823

Query: 543  FPLDPMLSKMIIASDKYKCSDEIISIAAMLSTGSLIFYRPKKKPVHADNARKLFYTGNVG 722
            FPLDPMLSKMI+AS+KYKCSDEIIS+A+MLS G+ IFYRPK K VHADNAR  F+TGNVG
Sbjct: 824  FPLDPMLSKMIVASEKYKCSDEIISVASMLSIGNSIFYRPKDKQVHADNARLNFHTGNVG 883

Query: 723  DHVALLNVYRSWKENDYSHQWCYENYVQVKSMKRARD 833
            DH+ALLNVY SWKE DYS QWCYENY+QV+SMKRARD
Sbjct: 884  DHIALLNVYNSWKETDYSTQWCYENYIQVRSMKRARD 920


>ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16 isoform 2 [Glycine max]
          Length = 1035

 Score =  471 bits (1212), Expect = e-131
 Identities = 231/277 (83%), Positives = 254/277 (91%)
 Frame = +3

Query: 3    KIAELIICPIYANLPTEMQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDTGFVKI 182
            KI+ELIICPIYANLPTE+QAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID GF K+
Sbjct: 634  KISELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKM 693

Query: 183  KSYNPRTGMESLLVTPISKASANQRAGRSGRTGPGKCFRLYTFHSYSNDMEDNTVPEIQR 362
            KSYNPRTGMESLLVTPISKASANQRAGRSGRTGPGKCFRLYT ++Y ND++DNTVPEIQR
Sbjct: 694  KSYNPRTGMESLLVTPISKASANQRAGRSGRTGPGKCFRLYTAYNYHNDLDDNTVPEIQR 753

Query: 363  TNLANVVLSLKSLGISDVSEFDFMDPPAQECLIQALKLLYALGALNKKGELTKVGRKMAE 542
            TNLANVVL+LKSLGI D+  FDFMDPP  E L++AL+LL+AL ALNK GELTKVGR+MAE
Sbjct: 754  TNLANVVLTLKSLGIHDLLNFDFMDPPPAEALLKALELLFALSALNKLGELTKVGRRMAE 813

Query: 543  FPLDPMLSKMIIASDKYKCSDEIISIAAMLSTGSLIFYRPKKKPVHADNARKLFYTGNVG 722
            FPLDPMLSKMI+AS+ YKCSD+IISIAAMLS G+ IFYRPK K VHADNAR  F+TGNVG
Sbjct: 814  FPLDPMLSKMIVASENYKCSDDIISIAAMLSVGNSIFYRPKDKQVHADNARLNFHTGNVG 873

Query: 723  DHVALLNVYRSWKENDYSHQWCYENYVQVKSMKRARD 833
            DH+ALL VY SWKE +YS QWCYENY+QV+SMKRARD
Sbjct: 874  DHMALLKVYNSWKETNYSTQWCYENYIQVRSMKRARD 910


>ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16 isoform 1 [Glycine max]
          Length = 1044

 Score =  471 bits (1212), Expect = e-131
 Identities = 231/277 (83%), Positives = 254/277 (91%)
 Frame = +3

Query: 3    KIAELIICPIYANLPTEMQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDTGFVKI 182
            KI+ELIICPIYANLPTE+QAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID GF K+
Sbjct: 643  KISELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKM 702

Query: 183  KSYNPRTGMESLLVTPISKASANQRAGRSGRTGPGKCFRLYTFHSYSNDMEDNTVPEIQR 362
            KSYNPRTGMESLLVTPISKASANQRAGRSGRTGPGKCFRLYT ++Y ND++DNTVPEIQR
Sbjct: 703  KSYNPRTGMESLLVTPISKASANQRAGRSGRTGPGKCFRLYTAYNYHNDLDDNTVPEIQR 762

Query: 363  TNLANVVLSLKSLGISDVSEFDFMDPPAQECLIQALKLLYALGALNKKGELTKVGRKMAE 542
            TNLANVVL+LKSLGI D+  FDFMDPP  E L++AL+LL+AL ALNK GELTKVGR+MAE
Sbjct: 763  TNLANVVLTLKSLGIHDLLNFDFMDPPPAEALLKALELLFALSALNKLGELTKVGRRMAE 822

Query: 543  FPLDPMLSKMIIASDKYKCSDEIISIAAMLSTGSLIFYRPKKKPVHADNARKLFYTGNVG 722
            FPLDPMLSKMI+AS+ YKCSD+IISIAAMLS G+ IFYRPK K VHADNAR  F+TGNVG
Sbjct: 823  FPLDPMLSKMIVASENYKCSDDIISIAAMLSVGNSIFYRPKDKQVHADNARLNFHTGNVG 882

Query: 723  DHVALLNVYRSWKENDYSHQWCYENYVQVKSMKRARD 833
            DH+ALL VY SWKE +YS QWCYENY+QV+SMKRARD
Sbjct: 883  DHMALLKVYNSWKETNYSTQWCYENYIQVRSMKRARD 919


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