BLASTX nr result

ID: Cnidium21_contig00028712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028712
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica...   200   9e-50
emb|CBI30650.3| unnamed protein product [Vitis vinifera]              200   9e-50
ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinu...   192   2e-47
ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helica...   188   3e-46
ref|XP_003593709.1| ATP-dependent RNA helicase dhx8 [Medicago tr...   178   5e-43

>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis
           vinifera]
          Length = 695

 Score =  200 bits (509), Expect = 9e-50
 Identities = 99/118 (83%), Positives = 110/118 (93%)
 Frame = +1

Query: 4   GPKTEPAILSVEGRGFSVQVFYAEEPVPDYLRAAVSTVMSIHNQEPPGDILVFLTGQDDI 183
           GP+T+PAILSVEGRGF+VQ+ + EEPVPDYL+AAVSTV+SIH QEP GDILVFLTG++DI
Sbjct: 228 GPRTDPAILSVEGRGFNVQIHHIEEPVPDYLQAAVSTVLSIHEQEPMGDILVFLTGENDI 287

Query: 184 DAAVELLTEEAQNNGKPSVGLTILPLYSGLSRADQDLVFSPTPRGKRKVVISTNIAET 357
           DAAV+LL EEAQNNGK S GL +LPLYSGLSRADQDLVFSPTPRGKRKVVISTNIAET
Sbjct: 288 DAAVQLLNEEAQNNGKHSSGLVVLPLYSGLSRADQDLVFSPTPRGKRKVVISTNIAET 345


>emb|CBI30650.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  200 bits (509), Expect = 9e-50
 Identities = 99/118 (83%), Positives = 110/118 (93%)
 Frame = +1

Query: 4   GPKTEPAILSVEGRGFSVQVFYAEEPVPDYLRAAVSTVMSIHNQEPPGDILVFLTGQDDI 183
           GP+T+PAILSVEGRGF+VQ+ + EEPVPDYL+AAVSTV+SIH QEP GDILVFLTG++DI
Sbjct: 227 GPRTDPAILSVEGRGFNVQIHHIEEPVPDYLQAAVSTVLSIHEQEPMGDILVFLTGENDI 286

Query: 184 DAAVELLTEEAQNNGKPSVGLTILPLYSGLSRADQDLVFSPTPRGKRKVVISTNIAET 357
           DAAV+LL EEAQNNGK S GL +LPLYSGLSRADQDLVFSPTPRGKRKVVISTNIAET
Sbjct: 287 DAAVQLLNEEAQNNGKHSSGLVVLPLYSGLSRADQDLVFSPTPRGKRKVVISTNIAET 344


>ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538218|gb|EEF39827.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 696

 Score =  192 bits (488), Expect = 2e-47
 Identities = 96/118 (81%), Positives = 106/118 (89%)
 Frame = +1

Query: 4   GPKTEPAILSVEGRGFSVQVFYAEEPVPDYLRAAVSTVMSIHNQEPPGDILVFLTGQDDI 183
           GP+ EPAILSVEGRGF+VQ+ Y EE V DY+RA VSTV+SIH+QEP GDILVFLTGQDDI
Sbjct: 229 GPRKEPAILSVEGRGFNVQILYVEEAVADYVRATVSTVLSIHDQEPAGDILVFLTGQDDI 288

Query: 184 DAAVELLTEEAQNNGKPSVGLTILPLYSGLSRADQDLVFSPTPRGKRKVVISTNIAET 357
           DAAV+LLTEEAQ  GK S GL +LPLYSGLSRA+QDLVFSPTPRGKRK+VISTNIAET
Sbjct: 289 DAAVQLLTEEAQVKGKNSSGLIVLPLYSGLSRAEQDLVFSPTPRGKRKIVISTNIAET 346


>ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus] gi|449515633|ref|XP_004164853.1| PREDICTED:
           probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus]
          Length = 696

 Score =  188 bits (478), Expect = 3e-46
 Identities = 95/117 (81%), Positives = 106/117 (90%)
 Frame = +1

Query: 7   PKTEPAILSVEGRGFSVQVFYAEEPVPDYLRAAVSTVMSIHNQEPPGDILVFLTGQDDID 186
           PK EPAILSVEGRGF+VQ+FY EEPV DY+++AVSTV+SIH QEPPGDILVFLTGQDDID
Sbjct: 230 PKVEPAILSVEGRGFNVQIFYLEEPVSDYVQSAVSTVLSIHEQEPPGDILVFLTGQDDID 289

Query: 187 AAVELLTEEAQNNGKPSVGLTILPLYSGLSRADQDLVFSPTPRGKRKVVISTNIAET 357
           AAV+LL EE QN+ K S  L +LPLYSGLSRA+QDL+FSPTPRGKRKVVISTNIAET
Sbjct: 290 AAVQLLIEEGQNDRKKS-ELIVLPLYSGLSRAEQDLIFSPTPRGKRKVVISTNIAET 345


>ref|XP_003593709.1| ATP-dependent RNA helicase dhx8 [Medicago truncatula]
           gi|355482757|gb|AES63960.1| ATP-dependent RNA helicase
           dhx8 [Medicago truncatula]
          Length = 701

 Score =  178 bits (451), Expect = 5e-43
 Identities = 90/119 (75%), Positives = 101/119 (84%)
 Frame = +1

Query: 1   HGPKTEPAILSVEGRGFSVQVFYAEEPVPDYLRAAVSTVMSIHNQEPPGDILVFLTGQDD 180
           +G K EPAILSVEGRGF+VQ+ +AEEPV DY++AAVSTV+ IH +E  GD+LVFLTGQDD
Sbjct: 233 NGLKVEPAILSVEGRGFNVQINFAEEPVQDYVQAAVSTVLLIHERESTGDVLVFLTGQDD 292

Query: 181 IDAAVELLTEEAQNNGKPSVGLTILPLYSGLSRADQDLVFSPTPRGKRKVVISTNIAET 357
           IDAAV L  EE QNN K S GL +LPLYSGL RADQ+LVFSP PRGKRKVVISTNIAET
Sbjct: 293 IDAAVHLFNEEIQNNRKHSSGLVVLPLYSGLPRADQELVFSPAPRGKRKVVISTNIAET 351


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