BLASTX nr result

ID: Cnidium21_contig00028693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028693
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN10954.2| APETALA2-like protein [Ipomoea nil]                     58   9e-07

>gb|ABN10954.2| APETALA2-like protein [Ipomoea nil]
          Length = 451

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
 Frame = +3

Query: 30  NKNQESADTHHNLDLSLWISPPSNSQKGNNSVRSLCLNDVASHLSTVKRTKVE-----RF 194
           NKN     T+ +LDL+LWISPP +  K   + R L  N  A  LS +KR KVE      +
Sbjct: 298 NKNTRDGGTNASLDLNLWISPPLDGPKRPENARKLQFNFEARDLSLLKRVKVECTPGTPY 357

Query: 195 APALAGRETPYYLPSWPGNHPGLAPNYE 278
            PA+A + +      WPG    L PN E
Sbjct: 358 GPAMASQYS-----RWPGLQSALTPNNE 380


Top