BLASTX nr result
ID: Cnidium21_contig00028676
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00028676
(624 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002324616.1| predicted protein [Populus trichocarpa] gi|2... 161 8e-38
ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 159 3e-37
ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 149 3e-34
ref|XP_002530760.1| Ubiquitin carboxyl-terminal hydrolase, putat... 146 3e-33
ref|XP_003609454.1| Ubiquitin carboxyl-terminal hydrolase [Medic... 140 1e-31
>ref|XP_002324616.1| predicted protein [Populus trichocarpa] gi|222866050|gb|EEF03181.1|
predicted protein [Populus trichocarpa]
Length = 566
Score = 161 bits (408), Expect = 8e-38
Identities = 91/200 (45%), Positives = 119/200 (59%), Gaps = 17/200 (8%)
Frame = +1
Query: 76 MCSITNNNNDDKHHHSIPPSCPHLHTFRSTHG---FRSLQQCFHIKPL-GRVAIQRDPHH 243
M S N+++ H SIPP CPHL FRS +G F LQ C IKP GR +I+RDP
Sbjct: 1 MSSKINHHHHINGHDSIPPPCPHLADFRSRNGTKPFHLLQNCLRIKPPHGRASIRRDPSE 60
Query: 244 HPLCGSCL--SLHRLYACLSCATISCHR---------HLSDHSSDHPISVDIDRAEIFCS 390
P CG+C S+ R+YAC++CATISCH H + + H ISVD+DRAE+FC
Sbjct: 61 IPRCGACAVSSVPRIYACVTCATISCHAPPEPSHAAAHAASMAPGHEISVDVDRAELFCC 120
Query: 391 LCNDQVYDLDFDAAVVIAQLTSGAHLEPEKNGI--KRRRVEYCNQWVPDLGQKELIENES 564
C D VYD DFDAAVV++ + H + + KRR VEY W+PD+ ++ L+ N S
Sbjct: 121 ACRDYVYDRDFDAAVVLSSKANNIHSNVNSDNLRKKRRIVEY-RPWLPDIQERVLVNNNS 179
Query: 565 SALGETDNDNVPLGLKGLNN 624
S L ++ P GL+GLNN
Sbjct: 180 SVLNFVEDR--PWGLRGLNN 197
>ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
vinifera]
Length = 587
Score = 159 bits (403), Expect = 3e-37
Identities = 91/199 (45%), Positives = 118/199 (59%), Gaps = 29/199 (14%)
Frame = +1
Query: 115 HHSIPPSCPHLHTFRSTHG---FRSLQQCFHIKPLGRVAIQRDPHHHPLCGSC--LSLHR 279
H S P CPHL +R+ +G FR+LQ+C +KPLGR AI+RDP P CG+C + R
Sbjct: 3 HRSYVP-CPHLAEYRTRNGSKPFRALQECLRVKPLGRAAIRRDPSEVPRCGACGEAARSR 61
Query: 280 LYACLSCATISCHR-------HLSDHSSD----HPISVDIDRAEIFCSLCNDQVYDLDFD 426
LYAC++CA +SCH H + H+ H I+VD+DRAE+FC C DQVYD DFD
Sbjct: 62 LYACVTCAAVSCHSSDSPSPSHAAAHAVSMPPGHEIAVDVDRAELFCCACRDQVYDRDFD 121
Query: 427 AAVVIAQLTSGA-------HLEPEKNGIKRRRVEYCNQWVPDLGQKELIENESSALGETD 585
AAVV+AQ T+ P +N KRRRV+Y W PDL ++ L+ SS L T+
Sbjct: 122 AAVVVAQTTASTLGGGSIRSSPPPENLRKRRRVDY-RPWTPDLRERVLMTRNSSPLQRTE 180
Query: 586 N------DNVPLGLKGLNN 624
N+P GL+GLNN
Sbjct: 181 GADGANLSNLPWGLRGLNN 199
>ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
sativus] gi|449518463|ref|XP_004166261.1| PREDICTED:
ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
sativus]
Length = 602
Score = 149 bits (377), Expect = 3e-34
Identities = 91/201 (45%), Positives = 115/201 (57%), Gaps = 35/201 (17%)
Frame = +1
Query: 127 PPSCPHLHTFRSTHG---FRSLQQCFHIKPLG-RVAIQRDPHHHPLCGSC--LSLHRLYA 288
PPSCPHL FRS +G FR LQ C +KP G R AI+RDP+ P C SC + RLYA
Sbjct: 18 PPSCPHLADFRSRNGSKSFRLLQDCLRVKPPGGRAAIRRDPNEVPRCSSCGDSARPRLYA 77
Query: 289 CLSCATISCHR---------HLSDHSSDHPISVDIDRAEIFCSLCNDQVYDLDFDAAVVI 441
C++CA +SCH H + H I+VD+DRAE+FC C DQVYD DFDAAVV+
Sbjct: 78 CVTCAAVSCHAPPSHSHAAAHAESMPTGHEIAVDVDRAELFCCACRDQVYDRDFDAAVVL 137
Query: 442 AQLT-----------SGAHLE----PEKNGIKRRRVEYCNQWVPDLGQKELIENESSALG 576
AQ T SG P +N KRRRV+Y W+PDL ++ L+ SS L
Sbjct: 138 AQTTASTLGGNAVSSSGVSPSQPSLPPENLRKRRRVDY-QPWMPDLRERVLVGANSSPLD 196
Query: 577 ETDND-----NVPLGLKGLNN 624
+++ +P GL+GLNN
Sbjct: 197 CVNSNLGSESELPWGLRGLNN 217
>ref|XP_002530760.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223529676|gb|EEF31620.1| Ubiquitin carboxyl-terminal
hydrolase, putative [Ricinus communis]
Length = 577
Score = 146 bits (369), Expect = 3e-33
Identities = 91/190 (47%), Positives = 116/190 (61%), Gaps = 19/190 (10%)
Frame = +1
Query: 112 HHHSIPPSCPHLHTFRSTHG---FRSLQQCFHIKPLG-RVAIQRDPHHHPLCGSC--LSL 273
H +P CPHL F S +G FR LQ C IKP G R AI+R+P P CG+C S
Sbjct: 7 HRSHLP--CPHLAEFHSRNGSKPFRFLQDCLRIKPPGGRAAIRREPSEVPRCGACGESSR 64
Query: 274 HRLYACLSCATISCHR-----HLSDHSSD--HPISVDIDRAEIFCSLCNDQVYDLDFDAA 432
RLYAC++CATISCH H + H++ H I+VD+DRAE+FC C DQVYD DFDAA
Sbjct: 65 PRLYACVTCATISCHAPPGPSHAAAHATSPGHEIAVDVDRAELFCCACRDQVYDRDFDAA 124
Query: 433 VVIAQLTS-----GAHLEPEKNGI-KRRRVEYCNQWVPDLGQKELIENESSALGETDNDN 594
VV++Q TS A L + + KRRRV+Y W PD+ + L+E+ SS L +
Sbjct: 125 VVLSQTTSFKAAGNAILSSKPENLRKRRRVDY-RPWRPDVRDRMLMESGSSPL--EYSSE 181
Query: 595 VPLGLKGLNN 624
+P GL+GLNN
Sbjct: 182 MPRGLRGLNN 191
>ref|XP_003609454.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355510509|gb|AES91651.1| Ubiquitin carboxyl-terminal
hydrolase [Medicago truncatula]
Length = 671
Score = 140 bits (354), Expect = 1e-31
Identities = 86/195 (44%), Positives = 109/195 (55%), Gaps = 29/195 (14%)
Frame = +1
Query: 127 PPSCPHLHTFR--STHGFRSLQQCFHIKPLG-RVAIQRDPHHHPLCGSC--LSLHRLYAC 291
P CPHL FR ST F SL C IKP G R +++RDPH P C +C + RLYAC
Sbjct: 11 PQPCPHLAEFRRTSTKPFLSLHNCLRIKPPGGRASLRRDPHEIPHCNACGLSAPSRLYAC 70
Query: 292 LSCATISCHR-----------HLSDHSSDHPISVDIDRAEIFCSLCNDQVYDLDFDAAVV 438
+SCA +SCH H + S H I++D+DRAE+FC +C DQVYD DFDAAVV
Sbjct: 71 ISCAAVSCHSSTVGVISHAAAHAASMSPGHQIAIDVDRAELFCCVCRDQVYDRDFDAAVV 130
Query: 439 IAQLTSGAHLEPEKNGI-------------KRRRVEYCNQWVPDLGQKELIENESSALGE 579
IAQ + + EK+ + KRRRV+Y PDL ++ LI + SS +
Sbjct: 131 IAQTVASTIGDVEKSTVIPMPSTTHPENLRKRRRVDY-RPSTPDLRERALIGSCSSPINV 189
Query: 580 TDNDNVPLGLKGLNN 624
D P GL+GLNN
Sbjct: 190 PD---FPRGLRGLNN 201