BLASTX nr result

ID: Cnidium21_contig00028657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028657
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]    78   9e-13
ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002324808.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002871479.1| predicted protein [Arabidopsis lyrata subsp....    58   7e-07
ref|NP_196714.1| embryonic flower 1 (EMF1) [Arabidopsis thaliana...    58   9e-07

>emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]
          Length = 1388

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 51/144 (35%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
 Frame = -2

Query: 441  PSALLGQDIVKSQRPEKAKKASLLQQTKDWRSRTTVGLSG-VPDMIRDCNPGQDKQKGIL 265
            P+ L+ Q + +S+  EK+K      Q +   SR +    G       +  P  D QK   
Sbjct: 1219 PAGLIDQVLPRSRGKEKSKVLPPPIQNRGCTSRKSSSTCGDYSGTNHESIPIHDTQKRFP 1278

Query: 264  GASAEVVFPVERNAPKVTENQKNLSSCHID---GTIMPLKDMSKEEVCIVSRNPADFSIP 94
            GAS  + FP++   P   EN     +       GT  P+   S+ E+C +++NPADFS+P
Sbjct: 1279 GASNSMRFPLQ---PHTIENSIECIALETHCNGGTFWPINSRSETEICSINKNPADFSVP 1335

Query: 93   DAGNIYMIGSGDLKFSKDFSCRYR 22
             AGNIYMIG+ DLKF K  S   R
Sbjct: 1336 VAGNIYMIGAEDLKFGKSISSENR 1359


>ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|222855527|gb|EEE93074.1|
            predicted protein [Populus trichocarpa]
          Length = 1309

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/85 (42%), Positives = 50/85 (58%)
 Frame = -2

Query: 294  PGQDKQKGILGASAEVVFPVERNAPKVTENQKNLSSCHIDGTIMPLKDMSKEEVCIVSRN 115
            P  + Q    GAS   +FP+   A +   N+  L S   + T+   K  S+ EVC V+RN
Sbjct: 1190 PAHNMQTMFYGASDSSMFPLPFRALE-KPNKHKLESPANNRTVHAHKSSSETEVCSVNRN 1248

Query: 114  PADFSIPDAGNIYMIGSGDLKFSKD 40
            PADF++P+AGN+YMI   DLKF K+
Sbjct: 1249 PADFTVPEAGNMYMIVGEDLKFEKE 1273


>ref|XP_002324808.1| predicted protein [Populus trichocarpa] gi|222866242|gb|EEF03373.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/56 (50%), Positives = 37/56 (66%)
 Frame = -2

Query: 207 NQKNLSSCHIDGTIMPLKDMSKEEVCIVSRNPADFSIPDAGNIYMIGSGDLKFSKD 40
           N+  L S   +  + P K  S+ EVC V+RNPADF+IP+AGN+YMI    L+F KD
Sbjct: 452 NKDKLKSLDNNRIVHPHKSSSETEVCSVNRNPADFTIPEAGNMYMIAGEALRFEKD 507


>ref|XP_002871479.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317316|gb|EFH47738.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1102

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = -2

Query: 270  ILGASAEVVFPVERNAPKVTENQKNLS-SCHIDGTIMPLKDMSKEEVCIVSRNPADFSIP 94
            +LGAS  ++ P++ +     + QK  + SC+ + +  P+K+ S   VC V+RNPADF+IP
Sbjct: 996  LLGASNSMMLPLKFHMRDKEKKQKRKAESCNNNASAWPVKNSSGSIVCSVNRNPADFTIP 1055

Query: 93   DAGNIYMIGSGDLKFSK 43
            + GN+YM+    LK  K
Sbjct: 1056 EPGNVYMLTGEHLKARK 1072


>ref|NP_196714.1| embryonic flower 1 (EMF1) [Arabidopsis thaliana]
            gi|75264387|sp|Q9LYD9.1|EMF1_ARATH RecName: Full=Protein
            EMBRYONIC FLOWER 1 gi|15430697|gb|AAK98528.1|AF319968_1
            embryonic flower 1 [Arabidopsis thaliana]
            gi|7573410|emb|CAB87713.1| putative protein [Arabidopsis
            thaliana] gi|332004309|gb|AED91692.1| embryonic flower 1
            (EMF1) [Arabidopsis thaliana]
          Length = 1096

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = -2

Query: 270  ILGASAEVVFPVERNAPKVTENQKNLS-SCHIDGTIMPLKDMSKEEVCIVSRNPADFSIP 94
            +LGAS  ++ P++ +     + QK  + SC+ + +  P+K+ S   VC V+RNPADF+IP
Sbjct: 990  LLGASNSMMLPLKFHMTDKEKKQKRKAESCNNNASAGPVKNSSGPIVCSVNRNPADFTIP 1049

Query: 93   DAGNIYMIGSGDLKFSK 43
            + GN+YM+    LK  K
Sbjct: 1050 EPGNVYMLTGEHLKVRK 1066


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