BLASTX nr result

ID: Cnidium21_contig00028624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028624
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632807.1| PREDICTED: LOW QUALITY PROTEIN: trafficking ...   145   3e-33
ref|XP_003581395.1| PREDICTED: trafficking protein particle comp...   145   3e-33
gb|ACG28109.1| trafficking protein particle complex protein 2 [Z...   141   5e-32
tpg|DAA41796.1| TPA: Trafficking protein particle complex protei...   141   6e-32
ref|XP_002461243.1| hypothetical protein SORBIDRAFT_02g043460 [S...   141   6e-32

>ref|XP_003632807.1| PREDICTED: LOW QUALITY PROTEIN: trafficking protein particle
           complex subunit 2-like [Vitis vinifera]
          Length = 135

 Score =  145 bits (367), Expect = 3e-33
 Identities = 70/83 (84%), Positives = 79/83 (95%)
 Frame = +1

Query: 124 MTSTACFMIISKNDIPIYEAQVGAAPKKEDVAQQHQFILHAALDIVQDVAWTTSAMLLKA 303
           M STACF+I+S+NDIPIYEA+VG+A KKED AQQHQFILHAALD+VQD+AWTTSAM LKA
Sbjct: 1   MASTACFIIVSRNDIPIYEAEVGSAVKKEDAAQQHQFILHAALDVVQDLAWTTSAMFLKA 60

Query: 304 IDKFNDLVVSVYVTAGNTRLMLL 372
           ID+FNDLVVSVYVTAG+TRLMLL
Sbjct: 61  IDRFNDLVVSVYVTAGHTRLMLL 83


>ref|XP_003581395.1| PREDICTED: trafficking protein particle complex subunit 2-like
           [Brachypodium distachyon]
          Length = 246

 Score =  145 bits (366), Expect = 3e-33
 Identities = 68/86 (79%), Positives = 80/86 (93%)
 Frame = +1

Query: 115 IRQMTSTACFMIISKNDIPIYEAQVGAAPKKEDVAQQHQFILHAALDIVQDVAWTTSAML 294
           I QM +TACF+I+SKNDIPIYEA+VG+APKKED+A  HQFILHAALD+VQD+AWTTSAM 
Sbjct: 109 ISQMATTACFVIVSKNDIPIYEAEVGSAPKKEDLAYHHQFILHAALDVVQDLAWTTSAMF 168

Query: 295 LKAIDKFNDLVVSVYVTAGNTRLMLL 372
           LK++D+FNDLVVSVYVTAG+TR MLL
Sbjct: 169 LKSVDRFNDLVVSVYVTAGHTRFMLL 194


>gb|ACG28109.1| trafficking protein particle complex protein 2 [Zea mays]
          Length = 135

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/83 (79%), Positives = 78/83 (93%)
 Frame = +1

Query: 124 MTSTACFMIISKNDIPIYEAQVGAAPKKEDVAQQHQFILHAALDIVQDVAWTTSAMLLKA 303
           M STACF+I+SKNDIPIYEA+VG+APKKED++  HQFILHAALD+VQDVAWTT+AM LK+
Sbjct: 1   MASTACFVIVSKNDIPIYEAEVGSAPKKEDLSYHHQFILHAALDVVQDVAWTTNAMSLKS 60

Query: 304 IDKFNDLVVSVYVTAGNTRLMLL 372
           +D+FNDLVVSVYVTAG+TR MLL
Sbjct: 61  VDRFNDLVVSVYVTAGHTRFMLL 83


>tpg|DAA41796.1| TPA: Trafficking protein particle complex protein 2 [Zea mays]
          Length = 205

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/83 (78%), Positives = 78/83 (93%)
 Frame = +1

Query: 124 MTSTACFMIISKNDIPIYEAQVGAAPKKEDVAQQHQFILHAALDIVQDVAWTTSAMLLKA 303
           M STACF+I+SKNDIPIYEA+VG+APKKED++  HQFILHAALD+VQD+AWTT+AM LK+
Sbjct: 71  MASTACFVIVSKNDIPIYEAEVGSAPKKEDLSYHHQFILHAALDVVQDLAWTTNAMFLKS 130

Query: 304 IDKFNDLVVSVYVTAGNTRLMLL 372
           +D+FNDLVVSVYVTAG+TR MLL
Sbjct: 131 VDRFNDLVVSVYVTAGHTRFMLL 153


>ref|XP_002461243.1| hypothetical protein SORBIDRAFT_02g043460 [Sorghum bicolor]
           gi|241924620|gb|EER97764.1| hypothetical protein
           SORBIDRAFT_02g043460 [Sorghum bicolor]
          Length = 135

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/83 (78%), Positives = 78/83 (93%)
 Frame = +1

Query: 124 MTSTACFMIISKNDIPIYEAQVGAAPKKEDVAQQHQFILHAALDIVQDVAWTTSAMLLKA 303
           M STACF+I+SKNDIPIYEA+VG+APKKED++  HQFILHAALD+VQD+AWTT+AM LK+
Sbjct: 1   MASTACFVIVSKNDIPIYEAEVGSAPKKEDLSYHHQFILHAALDVVQDLAWTTNAMFLKS 60

Query: 304 IDKFNDLVVSVYVTAGNTRLMLL 372
           +D+FNDLVVSVYVTAG+TR MLL
Sbjct: 61  VDRFNDLVVSVYVTAGHTRFMLL 83


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