BLASTX nr result

ID: Cnidium21_contig00028584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028584
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307026.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002332954.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002332949.1| cc-nbs-lrr resistance protein [Populus trich...    62   4e-08
ref|XP_003633688.1| PREDICTED: uncharacterized protein LOC100852...    61   8e-08
emb|CBI35152.3| unnamed protein product [Vitis vinifera]               61   8e-08

>ref|XP_002307026.1| predicted protein [Populus trichocarpa] gi|222856475|gb|EEE94022.1|
           predicted protein [Populus trichocarpa]
          Length = 758

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
 Frame = -3

Query: 229 FPSLEELIIRGCENMRN----IQPAACFSKLTSVQINNCSKLKYLFCNNIAKDFSQLQKL 62
           FP LE L +    ++      I  A  F KLT +++ NC KLK+LF  +IA+  SQLQ +
Sbjct: 198 FPVLESLFLYNLVSLEKLCHGILTAESFRKLTIIEVGNCVKLKHLFPFSIARGLSQLQTI 257

Query: 61  NVSNCESMEAIIANEG 14
           N+S+C +ME I+A EG
Sbjct: 258 NISSCLTMEEIVAEEG 273


>ref|XP_002332954.1| predicted protein [Populus trichocarpa] gi|222834266|gb|EEE72743.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
 Frame = -3

Query: 250 LFDGMVTFPSLEELIIRGC--ENMRNIQPAA---CFSKLTSVQINNCSKLKYLFCNNIAK 86
           LF+  + FP+LE+L +     E + + QPA    C   L S+ + NCS L Y+  +++ +
Sbjct: 94  LFNTKILFPNLEDLKLSSIKVEKIWHDQPAVQAPCVKNLASIAVENCSNLNYIVASSMVE 153

Query: 85  DFSQLQKLNVSNCESMEAIIANEGTTDG 2
             +QL++L + NC+SME I+  EG  +G
Sbjct: 154 SLAQLKRLEICNCKSMEEIVVPEGIGEG 181


>ref|XP_002332949.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222834261|gb|EEE72738.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1340

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
 Frame = -3

Query: 250  LFDGMVTFPSLEELIIRGC--ENMRNIQPAA---CFSKLTSVQINNCSKLKYLFCNNIAK 86
            LF+  + FP+LE+L +     E + + QPA    C   L S+ + +CS L YL  +++ +
Sbjct: 926  LFNTKILFPNLEDLKLSSIKVEKIWHDQPAVQPPCVKNLASMVVESCSNLNYLLTSSMVE 985

Query: 85   DFSQLQKLNVSNCESMEAIIANEGTTDG 2
              +QL++L + NCESME I+  EG  +G
Sbjct: 986  SLAQLERLEICNCESMEEIVVPEGIGEG 1013


>ref|XP_003633688.1| PREDICTED: uncharacterized protein LOC100852821 [Vitis vinifera]
          Length = 1781

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
 Frame = -3

Query: 250  LFDGMVTFPSLEELIIRGCENMRNIQPAAC----FSKLTSVQINNCSKLKYLFCNNIAKD 83
            LFD  V FPSL  L I G +N++ I P       FSKL  V I++C +L  +F +++ K 
Sbjct: 1158 LFDERVAFPSLNFLTISGLDNVKKIWPNQIPQDSFSKLEKVTISSCGQLLNIFPSSLLKR 1217

Query: 82   FSQLQKLNVSNCESMEAIIANEGT 11
               L++L V +C S+EA+   EGT
Sbjct: 1218 LQSLERLFVDDCSSLEAVFDVEGT 1241



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
 Frame = -3

Query: 250  LFDGMVTFPSLEELIIRGCENMRNIQPAAC----FSKLTSVQINNCSKLKYLFCNNIAKD 83
            +FD  V FPSL+ L I G +N++ I P       FSKL  V++ +C +L  +F + + K 
Sbjct: 1341 VFDERVAFPSLDCLYIEGLDNVKKIWPNQIPQDSFSKLEVVKVASCGELLNIFPSCMLKR 1400

Query: 82   FSQLQKLNVSNCESMEAIIANEGT 11
               L++L+V  C S+EA+   EGT
Sbjct: 1401 LQSLERLSVHVCSSLEAVFDVEGT 1424


>emb|CBI35152.3| unnamed protein product [Vitis vinifera]
          Length = 1711

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
 Frame = -3

Query: 250  LFDGMVTFPSLEELIIRGCENMRNIQPAAC----FSKLTSVQINNCSKLKYLFCNNIAKD 83
            LFD  V FPSL  L I G +N++ I P       FSKL  V I++C +L  +F +++ K 
Sbjct: 1088 LFDERVAFPSLNFLTISGLDNVKKIWPNQIPQDSFSKLEKVTISSCGQLLNIFPSSLLKR 1147

Query: 82   FSQLQKLNVSNCESMEAIIANEGT 11
               L++L V +C S+EA+   EGT
Sbjct: 1148 LQSLERLFVDDCSSLEAVFDVEGT 1171



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
 Frame = -3

Query: 250  LFDGMVTFPSLEELIIRGCENMRNIQPAAC----FSKLTSVQINNCSKLKYLFCNNIAKD 83
            +FD  V FPSL+ L I G +N++ I P       FSKL  V++ +C +L  +F + + K 
Sbjct: 1271 VFDERVAFPSLDCLYIEGLDNVKKIWPNQIPQDSFSKLEVVKVASCGELLNIFPSCMLKR 1330

Query: 82   FSQLQKLNVSNCESMEAIIANEGT 11
               L++L+V  C S+EA+   EGT
Sbjct: 1331 LQSLERLSVHVCSSLEAVFDVEGT 1354


Top