BLASTX nr result

ID: Cnidium21_contig00028565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028565
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321646.1| predicted protein [Populus trichocarpa] gi|2...   221   5e-56
ref|XP_004138080.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   217   1e-54
ref|XP_002511290.1| copine, putative [Ricinus communis] gi|22355...   214   6e-54
ref|XP_002318092.1| predicted protein [Populus trichocarpa] gi|2...   210   1e-52
ref|XP_002279018.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   198   5e-49

>ref|XP_002321646.1| predicted protein [Populus trichocarpa] gi|222868642|gb|EEF05773.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score =  221 bits (563), Expect = 5e-56
 Identities = 110/138 (79%), Positives = 121/138 (87%), Gaps = 4/138 (2%)
 Frame = +1

Query: 130 HNEYPQASYPQPTQTYES----AYPPQSYGGWAPDSKKRPERKFSRIDDNFNSLEQVTEA 297
           HN YPQ+ Y QP+Q + +    A PPQSYG  AP+S+ R ERK+SRIDDN+NSLEQVT+A
Sbjct: 22  HNSYPQSPYAQPSQEHTAYQHYAPPPQSYGDRAPNSR-RLERKYSRIDDNYNSLEQVTDA 80

Query: 298 LAHAGLESSNLIVGIDFTKSNEWTGARSFNRRSLHHIGDNPNPYEEAISIIGKTLASFDE 477
           LA AGLESSNLIVGIDFTKSNEWTGARSFNRRSLHHIGD  NPYE+AISIIGKTL+SFDE
Sbjct: 81  LARAGLESSNLIVGIDFTKSNEWTGARSFNRRSLHHIGDEQNPYEQAISIIGKTLSSFDE 140

Query: 478 DNLIPCFGFGDASTHDQE 531
           DNLIPCFGFGDASTHDQE
Sbjct: 141 DNLIPCFGFGDASTHDQE 158


>ref|XP_004138080.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
           gi|449525732|ref|XP_004169870.1| PREDICTED: E3
           ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
          Length = 432

 Score =  217 bits (552), Expect = 1e-54
 Identities = 111/162 (68%), Positives = 125/162 (77%), Gaps = 3/162 (1%)
 Frame = +1

Query: 55  MGGKSSKXXXXXXXXXXXXXXXXXXHNEYPQASYPQPTQT--YESAYPPQSYGGW-APDS 225
           MGGKSSK                  H  YP++ Y Q   T  YE A P  SYGG  AP++
Sbjct: 1   MGGKSSKHRSSRRNSSSRSNSQQWSHYGYPESPYTQSRSTPQYEYAPPTPSYGGTQAPET 60

Query: 226 KKRPERKFSRIDDNFNSLEQVTEALAHAGLESSNLIVGIDFTKSNEWTGARSFNRRSLHH 405
           +KR ERK+SRIDDN+NSL+QVTEALA AGLESSNLIVGIDFTKSNEWTGARSFNRRSLHH
Sbjct: 61  RKRLERKYSRIDDNYNSLDQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRRSLHH 120

Query: 406 IGDNPNPYEEAISIIGKTLASFDEDNLIPCFGFGDASTHDQE 531
           IG+  NPYE+AI+IIG+TL+SFDEDN+IPCFGFGDASTHDQE
Sbjct: 121 IGEEQNPYEQAIAIIGQTLSSFDEDNMIPCFGFGDASTHDQE 162


>ref|XP_002511290.1| copine, putative [Ricinus communis] gi|223550405|gb|EEF51892.1|
           copine, putative [Ricinus communis]
          Length = 433

 Score =  214 bits (545), Expect = 6e-54
 Identities = 106/135 (78%), Positives = 117/135 (86%), Gaps = 4/135 (2%)
 Frame = +1

Query: 139 YPQASYPQPTQTYES----AYPPQSYGGWAPDSKKRPERKFSRIDDNFNSLEQVTEALAH 306
           Y Q  Y QP Q Y +    A  PQSYGG AP+S +R ERK+S+IDDN+NSLEQVT+ALA 
Sbjct: 22  YQQPPYAQPGQEYMAYENYAPAPQSYGGQAPNSGRRLERKYSKIDDNYNSLEQVTDALAR 81

Query: 307 AGLESSNLIVGIDFTKSNEWTGARSFNRRSLHHIGDNPNPYEEAISIIGKTLASFDEDNL 486
           +GLESSNLIVGIDFTKSNEWTGARSFNRRSLHHIGD+ NPYE+AISIIGKTL+SFDEDNL
Sbjct: 82  SGLESSNLIVGIDFTKSNEWTGARSFNRRSLHHIGDDQNPYEQAISIIGKTLSSFDEDNL 141

Query: 487 IPCFGFGDASTHDQE 531
           IPCFGFGDASTHDQE
Sbjct: 142 IPCFGFGDASTHDQE 156


>ref|XP_002318092.1| predicted protein [Populus trichocarpa] gi|222858765|gb|EEE96312.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/138 (76%), Positives = 117/138 (84%), Gaps = 4/138 (2%)
 Frame = +1

Query: 130 HNEYPQASYPQPTQTYESAY----PPQSYGGWAPDSKKRPERKFSRIDDNFNSLEQVTEA 297
           H+ YPQ+ Y QP+Q Y        PPQSYG  AP+S+ R ERK+S+IDDN+NSL QVTEA
Sbjct: 31  HHSYPQSPYAQPSQEYMQYQHYVPPPQSYGDPAPNSR-RLERKYSKIDDNYNSLVQVTEA 89

Query: 298 LAHAGLESSNLIVGIDFTKSNEWTGARSFNRRSLHHIGDNPNPYEEAISIIGKTLASFDE 477
           LA AGLESSNLIVGIDFTKSNEWTGARSF+ RSLHHIGD+ NPYE+AI IIGKTL+SFDE
Sbjct: 90  LARAGLESSNLIVGIDFTKSNEWTGARSFSHRSLHHIGDDQNPYEQAIYIIGKTLSSFDE 149

Query: 478 DNLIPCFGFGDASTHDQE 531
           DNLIPCFGFGDASTHDQE
Sbjct: 150 DNLIPCFGFGDASTHDQE 167


>ref|XP_002279018.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Vitis vinifera]
           gi|297733667|emb|CBI14914.3| unnamed protein product
           [Vitis vinifera]
          Length = 433

 Score =  198 bits (503), Expect = 5e-49
 Identities = 101/163 (61%), Positives = 117/163 (71%), Gaps = 4/163 (2%)
 Frame = +1

Query: 55  MGGKSSKXXXXXXXXXXXXXXXXXXHNEYPQASYPQPTQTY----ESAYPPQSYGGWAPD 222
           MGGKSSK                  H++  Q  Y QP   Y       +PP +YGG  P 
Sbjct: 1   MGGKSSKRSISRQSSHLGSSSYSWGHHDQSQIPYAQPAPGYLPQQHYNHPPPTYGGQNPG 60

Query: 223 SKKRPERKFSRIDDNFNSLEQVTEALAHAGLESSNLIVGIDFTKSNEWTGARSFNRRSLH 402
           SK    RK+S+I+DN+NSL+QVT ALA AGLESSNLIVGIDFTKSNEWTGARSF RRSLH
Sbjct: 61  SK----RKYSKIEDNYNSLDQVTSALAQAGLESSNLIVGIDFTKSNEWTGARSFYRRSLH 116

Query: 403 HIGDNPNPYEEAISIIGKTLASFDEDNLIPCFGFGDASTHDQE 531
           H+GD+ NPYE+AISIIGKTL+ FD+DNLIPCFGFGDASTHD++
Sbjct: 117 HVGDDQNPYEQAISIIGKTLSKFDDDNLIPCFGFGDASTHDRD 159


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