BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028558
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16383.3| unnamed protein product [Vitis vinifera]              225   1e-56
ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   225   1e-56
ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   203   4e-50
ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m...   191   2e-46
ref|XP_002298404.1| predicted protein [Populus trichocarpa] gi|2...   191   3e-46

>emb|CBI16383.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  225 bits (573), Expect = 1e-56
 Identities = 109/184 (59%), Positives = 137/184 (74%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   RSYFSVDKRRRSFRVGSFKWLCGEHPNEISNLRCKVRHGPGFYDCSLIMESGESSHDKVA 182
           R+YFS+DKRRR FRVGS KW+  E P +I+ L+CKVRHGPGFY+CS  ME GE  H+ VA
Sbjct: 359 RNYFSLDKRRRLFRVGSLKWISREPPGQINQLQCKVRHGPGFYNCSFTMEPGEDGHEDVA 418

Query: 183 VVQLSEDDQGIAAGQFAAFYHERTCLGSGVILESWDDSGFPICSKALEIAGMEDKSKLGK 362
           VVQLSEDDQG+AAGQF AFY  R+C+GSGVILESWDD GFP+C+KALEIA MEDKSKLGK
Sbjct: 419 VVQLSEDDQGLAAGQFTAFYQGRSCIGSGVILESWDDQGFPVCAKALEIARMEDKSKLGK 478

Query: 363 PVKIKVQSCLPNSVTTE-DAREAHLEVVDSKSAINATRRRGSYQKTISASPYSWLQRFTK 539
           PVKIKV+   P   + + D  +   E+ +S++A+     R S  +  S  P +WLQ+  +
Sbjct: 479 PVKIKVRPETPPKGSDQIDGIKLDRELANSQAAVTDEISRSSEGEARSRFPMNWLQKIRE 538

Query: 540 KWMR 551
           KW++
Sbjct: 539 KWLQ 542


>ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera]
          Length = 540

 Score =  225 bits (573), Expect = 1e-56
 Identities = 109/184 (59%), Positives = 137/184 (74%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   RSYFSVDKRRRSFRVGSFKWLCGEHPNEISNLRCKVRHGPGFYDCSLIMESGESSHDKVA 182
           R+YFS+DKRRR FRVGS KW+  E P +I+ L+CKVRHGPGFY+CS  ME GE  H+ VA
Sbjct: 355 RNYFSLDKRRRLFRVGSLKWISREPPGQINQLQCKVRHGPGFYNCSFTMEPGEDGHEDVA 414

Query: 183 VVQLSEDDQGIAAGQFAAFYHERTCLGSGVILESWDDSGFPICSKALEIAGMEDKSKLGK 362
           VVQLSEDDQG+AAGQF AFY  R+C+GSGVILESWDD GFP+C+KALEIA MEDKSKLGK
Sbjct: 415 VVQLSEDDQGLAAGQFTAFYQGRSCIGSGVILESWDDQGFPVCAKALEIARMEDKSKLGK 474

Query: 363 PVKIKVQSCLPNSVTTE-DAREAHLEVVDSKSAINATRRRGSYQKTISASPYSWLQRFTK 539
           PVKIKV+   P   + + D  +   E+ +S++A+     R S  +  S  P +WLQ+  +
Sbjct: 475 PVKIKVRPETPPKGSDQIDGIKLDRELANSQAAVTDEISRSSEGEARSRFPMNWLQKIRE 534

Query: 540 KWMR 551
           KW++
Sbjct: 535 KWLQ 538


>ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus] gi|449524848|ref|XP_004169433.1| PREDICTED:
           tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus]
          Length = 538

 Score =  203 bits (517), Expect = 4e-50
 Identities = 102/187 (54%), Positives = 129/187 (68%), Gaps = 2/187 (1%)
 Frame = +3

Query: 3   RSYFSVDKRRRSFRVGSFKWLCGEHPNEISNLRCKVRHGPGFYDCSLIMESGESSHDKVA 182
           R+YFS DKRRR FRVGS KWL G  P++ + L+CKVRHGP FY C+L ME  E  H+ VA
Sbjct: 353 RNYFSFDKRRRVFRVGSLKWLSGFPPDQFTELQCKVRHGPSFYSCNLTMEHSEDGHEDVA 412

Query: 183 VVQLSEDDQGIAAGQFAAFYHERTCLGSGVILESWDDSGFPICSKALEIAGMEDKSKLGK 362
           VV LSEDDQG+AAGQFAAFY  R+C+GSGVILESWDD GFP+C KA+E A MEDKSKLGK
Sbjct: 413 VVHLSEDDQGLAAGQFAAFYKGRSCIGSGVILESWDDQGFPVCQKAIENAQMEDKSKLGK 472

Query: 363 PVKIKV--QSCLPNSVTTEDAREAHLEVVDSKSAINATRRRGSYQKTISASPYSWLQRFT 536
           P+KIKV  +S +  S   +D  E H ++ + ++ +    R  S  + ++     WL    
Sbjct: 473 PIKIKVKPESGMKESKAKDDT-EIHDKLRNEEATVVEQIREVSPDEAMATPSMKWLGSLK 531

Query: 537 KKWMRFF 557
           KK ++ F
Sbjct: 532 KKLLQIF 538


>ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ricinus communis] gi|223547418|gb|EEF48913.1|
           tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ricinus communis]
          Length = 497

 Score =  191 bits (485), Expect = 2e-46
 Identities = 88/131 (67%), Positives = 106/131 (80%)
 Frame = +3

Query: 3   RSYFSVDKRRRSFRVGSFKWLCGEHPNEISNLRCKVRHGPGFYDCSLIMESGESSHDKVA 182
           R+YFS DKRRR  RVGS +W  G  P E S L+CKVRHGPGFY+CS+++E GE     VA
Sbjct: 342 RNYFSFDKRRRLLRVGSLRWFNGSPPKETSELQCKVRHGPGFYNCSVVIEPGEVDDQDVA 401

Query: 183 VVQLSEDDQGIAAGQFAAFYHERTCLGSGVILESWDDSGFPICSKALEIAGMEDKSKLGK 362
           +VQL EDDQG+AAGQFAAFY  RTC+GSGVILESW+D GFP+C +ALE+A +EDKS+LGK
Sbjct: 402 IVQLCEDDQGLAAGQFAAFYKGRTCIGSGVILESWNDQGFPVCERALELARIEDKSELGK 461

Query: 363 PVKIKVQSCLP 395
           PVKIKV+  +P
Sbjct: 462 PVKIKVKPEIP 472


>ref|XP_002298404.1| predicted protein [Populus trichocarpa] gi|222845662|gb|EEE83209.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  191 bits (484), Expect = 3e-46
 Identities = 89/127 (70%), Positives = 104/127 (81%)
 Frame = +3

Query: 3   RSYFSVDKRRRSFRVGSFKWLCGEHPNEISNLRCKVRHGPGFYDCSLIMESGESSHDKVA 182
           R+YFS+DKRRRSFRVGS KWL G   +  + L+CKVRHGP FYDCS+ +E GE S ++V 
Sbjct: 279 RNYFSLDKRRRSFRVGSLKWLSGSPTDMTTQLQCKVRHGPTFYDCSVKIELGEDSPEEVV 338

Query: 183 VVQLSEDDQGIAAGQFAAFYHERTCLGSGVILESWDDSGFPICSKALEIAGMEDKSKLGK 362
            V L EDDQG+AAGQF AFY  RTC+GSGVILESWDD GFP+C KALE+A +EDKSKLGK
Sbjct: 339 AVHLCEDDQGLAAGQFTAFYQGRTCIGSGVILESWDDKGFPVCQKALELARLEDKSKLGK 398

Query: 363 PVKIKVQ 383
           PVKIKV+
Sbjct: 399 PVKIKVK 405