BLASTX nr result

ID: Cnidium21_contig00028529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028529
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609287.1| Dynein light chain [Medicago truncatula] gi|...   186   4e-45
ref|XP_002524465.1| axonemal dynein light chain, putative [Ricin...   174   2e-41
ref|XP_002281900.1| PREDICTED: uncharacterized protein LOC100259...   174   2e-41
emb|CAN63502.1| hypothetical protein VITISV_011677 [Vitis vinifera]   172   8e-41
ref|NP_197511.1| dynein light chain type 1-like protein [Arabido...   165   1e-38

>ref|XP_003609287.1| Dynein light chain [Medicago truncatula]
           gi|355510342|gb|AES91484.1| Dynein light chain [Medicago
           truncatula]
          Length = 245

 Score =  186 bits (473), Expect = 4e-45
 Identities = 117/248 (47%), Positives = 146/248 (58%), Gaps = 42/248 (16%)
 Frame = +3

Query: 150 MATKEKPKKGGGGATMHVYKLDTGHGMAPPSP--MVTKKMVSSSRSWGLLKRSKTYRENN 323
           MA +EK  K G    M++YK+ TG+     S   +  +K +SSSRSW    R+ T   NN
Sbjct: 1   MANQEKQHKKG---FMYIYKIGTGNQRKKDSEQGVEKEKKLSSSRSWLQRLRNPTRSYNN 57

Query: 324 -----------------------VGQIKSGEKVISVVE-------------EKGRKSVSN 395
                                   G    G   +S +E             E+GRKSVS 
Sbjct: 58  KELNNGGFVEARNSTSCFELESIKGGYVEGRNSVSCIEASSSPAIKRGIIVEEGRKSVSY 117

Query: 396 VVETRKSSV----SIMEGRKSVASKVEAINVEAMAGFLKAKVLVTDMPGFMQVHALRCAR 563
           V ET+ ++       +E RKSV S +E ++  ++   L+ KVLV+DMP FMQVHA RCAR
Sbjct: 118 VDETKLAAEEKVGKFVEARKSV-SHIETLS--SVIEKLQVKVLVSDMPSFMQVHAFRCAR 174

Query: 564 QTYDCLENFTPKTLAQNMKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMDNLYIL 743
           +TYD LE F+ K +A N+KKEFDK YGPAWHCIVG SFGSFVTHSTGCFLYFSM+NLYIL
Sbjct: 175 RTYDSLEEFSSKHIAHNIKKEFDKAYGPAWHCIVGPSFGSFVTHSTGCFLYFSMENLYIL 234

Query: 744 VFKTKVKK 767
           +FKTKVKK
Sbjct: 235 LFKTKVKK 242


>ref|XP_002524465.1| axonemal dynein light chain, putative [Ricinus communis]
           gi|223536253|gb|EEF37905.1| axonemal dynein light chain,
           putative [Ricinus communis]
          Length = 184

 Score =  174 bits (442), Expect = 2e-41
 Identities = 85/114 (74%), Positives = 99/114 (86%)
 Frame = +3

Query: 426 IMEGRKSVASKVEAINVEAMAGFLKAKVLVTDMPGFMQVHALRCARQTYDCLENFTPKTL 605
           ++E RKSV S VE  N+ ++A FL+ KVLVTDMPGFMQ+HA RCAR+TYD L+ F+ K +
Sbjct: 68  MVEARKSV-SHVET-NLASVASFLQVKVLVTDMPGFMQIHAFRCARRTYDSLDKFSSKHI 125

Query: 606 AQNMKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMDNLYILVFKTKVKK 767
           A N+KKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSM+ LYILVFKTKV+K
Sbjct: 126 AYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILVFKTKVQK 179


>ref|XP_002281900.1| PREDICTED: uncharacterized protein LOC100259374 [Vitis vinifera]
           gi|297738927|emb|CBI28172.3| unnamed protein product
           [Vitis vinifera]
          Length = 181

 Score =  174 bits (442), Expect = 2e-41
 Identities = 100/163 (61%), Positives = 118/163 (72%)
 Frame = +3

Query: 279 SWGLLKRSKTYRENNVGQIKSGEKVISVVEEKGRKSVSNVVETRKSSVSIMEGRKSVASK 458
           SWGL ++SKT REN       GE+V+     +G   V  VVE RKS VS +E        
Sbjct: 37  SWGL-RKSKTCRENAQ---YGGERVV-----EGGGGV--VVEARKS-VSCIE-------- 76

Query: 459 VEAINVEAMAGFLKAKVLVTDMPGFMQVHALRCARQTYDCLENFTPKTLAQNMKKEFDKV 638
               NV ++A FL+ KVLVTDMPGFMQVHA RCAR+T+D LE F+ K +A N+KKEFDKV
Sbjct: 77  ---TNVSSVAAFLQVKVLVTDMPGFMQVHAFRCARRTFDSLEKFSSKHMAYNIKKEFDKV 133

Query: 639 YGPAWHCIVGSSFGSFVTHSTGCFLYFSMDNLYILVFKTKVKK 767
           YGPAWHCIVGSSFGSFVTHSTG FLYFSM+ L+ILVFKTKV++
Sbjct: 134 YGPAWHCIVGSSFGSFVTHSTGGFLYFSMEKLFILVFKTKVQR 176


>emb|CAN63502.1| hypothetical protein VITISV_011677 [Vitis vinifera]
          Length = 184

 Score =  172 bits (436), Expect = 8e-41
 Identities = 96/163 (58%), Positives = 112/163 (68%)
 Frame = +3

Query: 279 SWGLLKRSKTYRENNVGQIKSGEKVISVVEEKGRKSVSNVVETRKSSVSIMEGRKSVASK 458
           SWGL K      +   G    GE+V+    E G      VVE RKS VS +E        
Sbjct: 37  SWGLRKSKTCLEKAQYG----GERVV----EGGGGGGGVVVEARKS-VSCIE-------- 79

Query: 459 VEAINVEAMAGFLKAKVLVTDMPGFMQVHALRCARQTYDCLENFTPKTLAQNMKKEFDKV 638
               NV ++A FL+ KVLVTDMPGFMQVHA RCAR+T+D LE F+ K +A N+KKEFDKV
Sbjct: 80  ---TNVSSVAAFLQVKVLVTDMPGFMQVHAFRCARRTFDSLEKFSSKHMAYNIKKEFDKV 136

Query: 639 YGPAWHCIVGSSFGSFVTHSTGCFLYFSMDNLYILVFKTKVKK 767
           YGPAWHCIVGSSFGSFVTHSTG FLYFSM+ L+ILVFKTKV++
Sbjct: 137 YGPAWHCIVGSSFGSFVTHSTGGFLYFSMEKLFILVFKTKVQR 179


>ref|NP_197511.1| dynein light chain type 1-like protein [Arabidopsis thaliana]
           gi|40822853|gb|AAR92244.1| At5g20110 [Arabidopsis
           thaliana] gi|45752676|gb|AAS76236.1| At5g20110
           [Arabidopsis thaliana] gi|332005413|gb|AED92796.1|
           dynein light chain type 1-like protein [Arabidopsis
           thaliana]
          Length = 209

 Score =  165 bits (417), Expect = 1e-38
 Identities = 92/207 (44%), Positives = 120/207 (57%), Gaps = 5/207 (2%)
 Frame = +3

Query: 159 KEKPKKGGGGATMHVYKLD---TGHGMAPPSPMVTKKMVSSSRSWGLLKRSKTYRENNVG 329
           +E+PKK    + M+ YK     + H +  P       + + S S   ++     + N   
Sbjct: 3   EERPKKSKKKSLMNFYKFSITSSKHSLINPKSKPKIPISTPSISQQEVEEKPIVQSNKSH 62

Query: 330 QIKSGEKVISVVEEKGRKSVSNVVETRKSSVSIMEGRKSVA--SKVEAINVEAMAGFLKA 503
           Q      +  +     R +     E +K   +  EGRKSV+   +  A  +EA A  L  
Sbjct: 63  QNHVMRDIFELETTCSRNN-----ERKKGGGAAEEGRKSVSHVERDTAARIEAAAEMLTV 117

Query: 504 KVLVTDMPGFMQVHALRCARQTYDCLENFTPKTLAQNMKKEFDKVYGPAWHCIVGSSFGS 683
           ++L  DMPGFMQ HA RCAR T D LE F+ K +A N+KKEFDK YGPAWHCIVGSSFGS
Sbjct: 118 RILAADMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGS 177

Query: 684 FVTHSTGCFLYFSMDNLYILVFKTKVK 764
           FVTHSTGCF+YFSMD LY+L+FKTKV+
Sbjct: 178 FVTHSTGCFIYFSMDKLYVLLFKTKVR 204


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