BLASTX nr result

ID: Cnidium21_contig00028528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028528
         (1496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LH88.1|Y3852_ARATH RecName: Full=Putative B3 domain-contain...    60   2e-06

>sp|Q9LH88.1|Y3852_ARATH RecName: Full=Putative B3 domain-containing protein At3g28852
            gi|11994794|dbj|BAB03184.1| unnamed protein product
            [Arabidopsis thaliana]
          Length = 120

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
 Frame = -1

Query: 1232 ITKALTLSDVDVTHPFLTLPRQPVENHVLVHLTQLEQDMLMN-KEQVNITAKDEDTGEVH 1056
            I K LT SDVD  +  L LP++  E  +L    ++E +++MN +  V +  KD +  E H
Sbjct: 19   INKRLTQSDVDYNNR-LHLPKREFEQFIL---PEMEWELVMNLRNSVEVIVKDVNGNEYH 74

Query: 1055 VMKLKWRGSYYNLIGKWGSIVRAKNLEVGREIKIRW 948
            V  +K++  +Y  +GKW  IVRAK  +   EI + W
Sbjct: 75   VTLVKYQNGHYYFMGKWMDIVRAKGYKRDDEISLLW 110


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