BLASTX nr result

ID: Cnidium21_contig00028524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028524
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methy...   176   6e-42
ref|XP_002511789.1| dimethyladenosine transferase, putative [Ric...   165   1e-38
ref|XP_004133887.1| PREDICTED: ribosomal RNA small subunit methy...   163   5e-38
ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methy...   162   1e-37
ref|XP_003534590.1| PREDICTED: ribosomal RNA small subunit methy...   160   3e-37

>ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methyltransferase A [Vitis
           vinifera] gi|296089082|emb|CBI38785.3| unnamed protein
           product [Vitis vinifera]
          Length = 335

 Score =  176 bits (446), Expect = 6e-42
 Identities = 84/109 (77%), Positives = 95/109 (87%)
 Frame = -3

Query: 731 FIMIATDPEYKLNVPRTNFFPRPKVDAAIVAFRLKQAVDYPAVSSTKSFFSMVNSAFNGK 552
           F+   +DPEYK  VPRTNFFP+P VDAA+V F+LKQAVDYP VSS KSFFS+VNSAFNGK
Sbjct: 226 FVNFYSDPEYKFKVPRTNFFPQPNVDAAVVVFKLKQAVDYPPVSSIKSFFSLVNSAFNGK 285

Query: 551 RKMLRKSLQHICLSSEIEEALRNINLPATSRPEELTIEDFVNLHGVIVK 405
           RKMLR+SLQHIC S EIEEALRN+ LPATSRPEELT++DFV LH +IVK
Sbjct: 286 RKMLRRSLQHICTSIEIEEALRNVGLPATSRPEELTLDDFVRLHNLIVK 334


>ref|XP_002511789.1| dimethyladenosine transferase, putative [Ricinus communis]
           gi|223548969|gb|EEF50458.1| dimethyladenosine
           transferase, putative [Ricinus communis]
          Length = 338

 Score =  165 bits (417), Expect = 1e-38
 Identities = 77/109 (70%), Positives = 92/109 (84%)
 Frame = -3

Query: 731 FIMIATDPEYKLNVPRTNFFPRPKVDAAIVAFRLKQAVDYPAVSSTKSFFSMVNSAFNGK 552
           F+   +DP YK  VPR+NFFP+P VDAA+V F+LKQ  DYPAVSS+KSFFS+VNSAFNGK
Sbjct: 229 FVNFYSDPVYKFKVPRSNFFPQPNVDAAVVTFKLKQTADYPAVSSSKSFFSLVNSAFNGK 288

Query: 551 RKMLRKSLQHICLSSEIEEALRNINLPATSRPEELTIEDFVNLHGVIVK 405
           RKMLR+SLQHIC S EIE+AL N+ LPATSRPEELT++DFV LH +I +
Sbjct: 289 RKMLRRSLQHICTSPEIEQALINVGLPATSRPEELTLDDFVKLHNLIAR 337


>ref|XP_004133887.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
           [Cucumis sativus]
          Length = 347

 Score =  163 bits (412), Expect = 5e-38
 Identities = 79/110 (71%), Positives = 94/110 (85%)
 Frame = -3

Query: 731 FIMIATDPEYKLNVPRTNFFPRPKVDAAIVAFRLKQAVDYPAVSSTKSFFSMVNSAFNGK 552
           F+   +DPE K  VPRTNFFP+P VDAA+V+F+LK+A DYPAVSSTKSFFSMVNSAFNGK
Sbjct: 238 FVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKRAADYPAVSSTKSFFSMVNSAFNGK 297

Query: 551 RKMLRKSLQHICLSSEIEEALRNINLPATSRPEELTIEDFVNLHGVIVKN 402
           RKMLRKSLQHIC S EIE+AL + +L  TSRPEEL+++DFV LH +IVK+
Sbjct: 298 RKMLRKSLQHICTSLEIEKALEDSSLLPTSRPEELSLDDFVKLHNLIVKH 347


>ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
           [Glycine max]
          Length = 341

 Score =  162 bits (409), Expect = 1e-37
 Identities = 80/109 (73%), Positives = 91/109 (83%)
 Frame = -3

Query: 731 FIMIATDPEYKLNVPRTNFFPRPKVDAAIVAFRLKQAVDYPAVSSTKSFFSMVNSAFNGK 552
           F+   +DPEYKL VPRTNFFP+P VDAA+V+F+LK   +YP VSSTKSFFSMVNSAFN K
Sbjct: 232 FVNFYSDPEYKLEVPRTNFFPQPNVDAAVVSFKLKLPSEYPQVSSTKSFFSMVNSAFNEK 291

Query: 551 RKMLRKSLQHICLSSEIEEALRNINLPATSRPEELTIEDFVNLHGVIVK 405
           RKMLRKSLQHIC S EIEEAL +I L ATSRPEELT++DFV LH +I K
Sbjct: 292 RKMLRKSLQHICTSLEIEEALTSIGLLATSRPEELTLDDFVKLHNLIAK 340


>ref|XP_003534590.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
           [Glycine max]
          Length = 341

 Score =  160 bits (405), Expect = 3e-37
 Identities = 79/109 (72%), Positives = 91/109 (83%)
 Frame = -3

Query: 731 FIMIATDPEYKLNVPRTNFFPRPKVDAAIVAFRLKQAVDYPAVSSTKSFFSMVNSAFNGK 552
           F+   +DPEYKL VPR+NFFP+P VDAA+V+F+LK   +YP VSSTKSFFSMVNSAFN K
Sbjct: 232 FVNFYSDPEYKLKVPRSNFFPQPNVDAAVVSFKLKLPSEYPQVSSTKSFFSMVNSAFNEK 291

Query: 551 RKMLRKSLQHICLSSEIEEALRNINLPATSRPEELTIEDFVNLHGVIVK 405
           RKMLRKSLQHIC S EIEEAL +I L ATSRPEELT++DFV LH +I K
Sbjct: 292 RKMLRKSLQHICTSLEIEEALTSIGLLATSRPEELTLDDFVKLHNLIAK 340


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