BLASTX nr result

ID: Cnidium21_contig00028451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028451
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555462.1| PREDICTED: transcriptional activator DEMETER...   130   6e-28
ref|XP_002530889.1| conserved hypothetical protein [Ricinus comm...   129   2e-27
gb|AEC12445.1| DNA N-glycosylase/DNA-(apurinic or apyrimidinic s...   127   5e-27
ref|XP_003535497.1| PREDICTED: transcriptional activator DEMETER...   126   9e-27
ref|XP_003520681.1| PREDICTED: protein ROS1-like [Glycine max]        125   2e-26

>ref|XP_003555462.1| PREDICTED: transcriptional activator DEMETER-like [Glycine max]
          Length = 1851

 Score =  130 bits (327), Expect = 6e-28
 Identities = 78/179 (43%), Positives = 112/179 (62%), Gaps = 8/179 (4%)
 Frame = -3

Query: 613  ECLLAQRDPNEHSS--VDYIVARMEFLSIHQKNR-----QLVVVHQSVGSSIVLYEGIFD 455
            EC     +P++  S  +D I+ ++  L + + N      Q  +V  +   S+V Y+  F+
Sbjct: 726  ECFAISEEPHQIYSNLIDEIICQLNDLKLGESNMTEMEGQKALVPYNGDRSVVPYQE-FE 784

Query: 454  PRKNNKKVQATVDLDKESERAWTMLMANGGSTTFDEPDSDQE-YWDRERRETINRVESIL 278
              K +K  +  VDLD E+ER W +LM  GGS   +  D ++E +WD ER     RV+S +
Sbjct: 785  LLKKHKP-RPKVDLDAETERTWKLLMGKGGSEGLEGTDKEKEKWWDEERNVFHGRVDSFI 843

Query: 277  SILREFQGNRRFSKWKGSVMDSVVGAYLTQNVSDHLSSSAFMSLAARFSVRDSKRSNRS 101
            + +   QG+RRFSKWKGSV+DSV+G +LTQNVSDHLSSSAFMSLA+RF ++ SK S +S
Sbjct: 844  ARMHLIQGDRRFSKWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLASRFPLQ-SKSSKKS 901


>ref|XP_002530889.1| conserved hypothetical protein [Ricinus communis]
            gi|223529542|gb|EEF31495.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1876

 Score =  129 bits (323), Expect = 2e-27
 Identities = 76/199 (38%), Positives = 122/199 (61%), Gaps = 7/199 (3%)
 Frame = -3

Query: 664  PSPENQMLKMIKDHLPKECLLAQRDPNEHS-----SVDYIVARMEFLSIHQ-KNRQLVVV 503
            PS +  ML+  K+ L  +   A+R   + +     +++ I+ RME L++++ K  Q  +V
Sbjct: 774  PSRKGNMLQTQKNILKDQKSTAKRKAGQPAKQKPITIEEIIYRMEHLNLNEVKGEQTAIV 833

Query: 502  HQSVGSSIVLYEGIFDPRKNNKKVQATVDLDKESERAWTMLMANGGSTTFDEPDSDQ-EY 326
                  +++ Y+G    +K  +K +  VDLD E+ER W +LM   G    +  D ++ ++
Sbjct: 834  PYKGDGALIPYDGFEIIKK--RKPRPKVDLDPETERVWKLLMWKEGGEGLEGTDQEKKQW 891

Query: 325  WDRERRETINRVESILSILREFQGNRRFSKWKGSVMDSVVGAYLTQNVSDHLSSSAFMSL 146
            W+ ERR    R +S ++ +   QG+RRFSKWKGSV+DSV+G +LTQNVSDHLSSSAFM+L
Sbjct: 892  WEEERRVFGGRADSFIARMHLVQGDRRFSKWKGSVVDSVIGVFLTQNVSDHLSSSAFMNL 951

Query: 145  AARFSVRDSKRSNRSPESE 89
            AA+F ++  +  NR+ E +
Sbjct: 952  AAKFPLKSMR--NRTCERD 968


>gb|AEC12445.1| DNA N-glycosylase/DNA-(apurinic or apyrimidinic site) lyase
            [Gossypium hirsutum]
          Length = 2055

 Score =  127 bits (319), Expect = 5e-27
 Identities = 74/170 (43%), Positives = 109/170 (64%), Gaps = 7/170 (4%)
 Frame = -3

Query: 571  VDYIVARMEFLSIHQKNRQ-------LVVVHQSVGSSIVLYEGIFDPRKNNKKVQATVDL 413
            V+ I+ R + L++ +KN +        +V++   G+ +V +EG F+  K  KKV+  VDL
Sbjct: 967  VEEIINRFKGLTLEEKNNKPKAELQNALVLYNGAGT-VVPFEG-FESIK--KKVRPRVDL 1022

Query: 412  DKESERAWTMLMANGGSTTFDEPDSDQEYWDRERRETINRVESILSILREFQGNRRFSKW 233
            D E+ R W +LM   G  T  E    +++W+ ERR    RV+S ++ +   QG+RRFSKW
Sbjct: 1023 DPETNRVWNLLMGKEGEDT--EGTDKEKWWEEERRVFHGRVDSFIARMHLVQGDRRFSKW 1080

Query: 232  KGSVMDSVVGAYLTQNVSDHLSSSAFMSLAARFSVRDSKRSNRSPESECI 83
            KGSV+DSV+G +LTQNVSDHLSSSAFMSLAA+F ++ S + + + E   I
Sbjct: 1081 KGSVVDSVIGVFLTQNVSDHLSSSAFMSLAAKFPLKSSCKGDCNAERTTI 1130


>ref|XP_003535497.1| PREDICTED: transcriptional activator DEMETER-like [Glycine max]
          Length = 1915

 Score =  126 bits (317), Expect = 9e-27
 Identities = 76/168 (45%), Positives = 109/168 (64%), Gaps = 7/168 (4%)
 Frame = -3

Query: 583  EHSS-VDYIVARMEFLSIHQKNRQLV-----VVHQSVGSSIVLYEGIFDPRKNNKKVQAT 422
            EHS+ +D I+ R   L + + N   +     +V  +   S+V Y+  F+  K +K  +  
Sbjct: 814  EHSNLIDEIICRPNDLKLRESNMSEMEGLKALVPYNGDRSVVPYQE-FELLKKHKP-RPK 871

Query: 421  VDLDKESERAWTMLMANGGSTTFDEPDSDQE-YWDRERRETINRVESILSILREFQGNRR 245
            VDLD E+ER W +LM   GS   +E D ++E +WD+ER     RV+S ++ +   QG+RR
Sbjct: 872  VDLDAETERTWKLLMGKVGSEGLEETDKEKEKWWDKERNVFHGRVDSFIARMHLIQGDRR 931

Query: 244  FSKWKGSVMDSVVGAYLTQNVSDHLSSSAFMSLAARFSVRDSKRSNRS 101
            FSKWKGSV+DSV+G +LTQNVSDHLSSSAFMSLA+RF ++ SK S ++
Sbjct: 932  FSKWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLASRFPLQ-SKSSKKT 978


>ref|XP_003520681.1| PREDICTED: protein ROS1-like [Glycine max]
          Length = 1764

 Score =  125 bits (314), Expect = 2e-26
 Identities = 69/147 (46%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
 Frame = -3

Query: 532  HQKNRQLVVVHQSVGSSIVLYEGIFDPRKNNKKVQATVDLDKESERAWTMLMANGGSTTF 353
            +QKN++LV  +     +I+ +EG FDP +  +  +  VDLD+E+ R W +LM +  S   
Sbjct: 686  NQKNKRLVHEY----GTIIPFEGPFDPIRKQRP-RPKVDLDEETNRVWKLLMLDINSHGI 740

Query: 352  DEPDSDQ-EYWDRERRETINRVESILSILREFQGNRRFSKWKGSVMDSVVGAYLTQNVSD 176
            +  D D+ ++W+ ER     R ES ++ +   QG+RRFS WKGSV+DSV+G +LTQNVSD
Sbjct: 741  NGTDEDKAKWWEDERNVFRGRAESFIARMHLVQGDRRFSPWKGSVVDSVIGVFLTQNVSD 800

Query: 175  HLSSSAFMSLAARFSVRDSKRSNRSPE 95
            HLSSSAFMSLAARF +R S      PE
Sbjct: 801  HLSSSAFMSLAARFPLRSSSNYKTCPE 827


Top