BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028449
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi...   184   9e-45
ref|XP_002519323.1| pentatricopeptide repeat-containing protein,...   130   1e-28
ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containi...   114   6e-24
ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containi...   113   1e-23
ref|XP_002328762.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23

>ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  184 bits (466), Expect = 9e-45
 Identities = 86/141 (60%), Positives = 106/141 (75%)
 Frame = -3

Query: 424 PPKSSTHKPHFTTHYTIESCSSMSELKQFHAQFIKLGLSNDNDAMGRVIKISAISHFGDL 245
           PP  S+ K H    Y ++SCS+M+ELKQ+H+Q I+LGLS DNDAMGRVIK  AIS  GDL
Sbjct: 11  PPSLSSAKAHKLPLYGLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDL 70

Query: 244 NYALKVFDLIPHPDAFIYNTVIRGCLQCHYVKDCIVMYCEMLKEGVLPNKFTFPPVIRGC 65
           NYAL+VFD IPHPDA+IYNT+ RG L+    ++CI MY  ML + V PNKFT+PP+IR C
Sbjct: 71  NYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRAC 130

Query: 64  SVGNGVEEGRQIHGQVLKFGF 2
            +   +EEG+QIH  VLKFGF
Sbjct: 131 CIDYAIEEGKQIHAHVLKFGF 151


>ref|XP_002519323.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541638|gb|EEF43187.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 396

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/123 (49%), Positives = 86/123 (69%)
 Frame = -3

Query: 370 SCSSMSELKQFHAQFIKLGLSNDNDAMGRVIKISAISHFGDLNYALKVFDLIPHPDAFIY 191
           +CS+M +L+Q+H+Q I+LGLS D   M ++I  SA+S+  DL YA+K+FD IP+PDAF Y
Sbjct: 53  NCSTMPDLRQYHSQIIRLGLSADKHVMTQLINFSALSNNRDLAYAIKLFDSIPNPDAFFY 112

Query: 190 NTVIRGCLQCHYVKDCIVMYCEMLKEGVLPNKFTFPPVIRGCSVGNGVEEGRQIHGQVLK 11
           NT+I+  LQ     + I++Y  ML+  V PN FTFP VIR C + + ++ G+QIH  VLK
Sbjct: 113 NTIIKAYLQHLSPTNSILLYSHMLQHSVFPNDFTFPSVIRACCIHDDIQLGKQIHAHVLK 172

Query: 10  FGF 2
            GF
Sbjct: 173 LGF 175


>ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 607

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/124 (44%), Positives = 79/124 (63%), Gaps = 1/124 (0%)
 Frame = -3

Query: 370 SCSSMSELKQFHAQFIKLGLSNDNDAMGRVIKISAISHFGDLNYALKVFDLIPHPDAFIY 191
           +CSSM+E+KQ H+  ++LGLS +N AM R+    ++S  GD+NYALK+F  +P+PD F+Y
Sbjct: 11  ACSSMAEVKQQHSLLLRLGLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTLPNPDTFLY 70

Query: 190 NTVIRGCLQCHYVKD-CIVMYCEMLKEGVLPNKFTFPPVIRGCSVGNGVEEGRQIHGQVL 14
           NT+ +            ++ Y  ML+  V PN FTFP +IR C +    EE +Q+H  VL
Sbjct: 71  NTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRACKL---EEEAKQLHAHVL 127

Query: 13  KFGF 2
           KFGF
Sbjct: 128 KFGF 131


>ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Glycine max]
          Length = 638

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/141 (41%), Positives = 89/141 (63%), Gaps = 2/141 (1%)
 Frame = -3

Query: 421 PKSSTHKPHFTTHYTIESCSSMSELKQFHAQFIKLGLSNDNDAMGRVIKISAISHFGDLN 242
           P ++++ P       I++C SM ELKQ HA  +K G ++DN     ++++SA S F D+ 
Sbjct: 8   PNTASYYPRLDVPQ-IKACKSMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIG 66

Query: 241 YALKVFDLIPHPDAFIYNTVIRGCLQCH-YVKDCIVMYCEMLKEG-VLPNKFTFPPVIRG 68
           YAL VFD +P  + F +NTVIR   +      D ++++C+ML E  V PN+FTFP V++ 
Sbjct: 67  YALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKA 126

Query: 67  CSVGNGVEEGRQIHGQVLKFG 5
           C+V   + EG+Q+HG +LKFG
Sbjct: 127 CAVMARLAEGKQVHGLLLKFG 147


>ref|XP_002328762.1| predicted protein [Populus trichocarpa] gi|222839060|gb|EEE77411.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 3/130 (2%)
 Frame = -3

Query: 382 YTIESCSSMSELKQFHAQFIKLGLSNDNDAMGRVIKISAISHFGD-LNYALKVFDLIPHP 206
           +  E C SMS+L+Q+H+Q I+LGLS+ N  +  +I   A +   D L YALK+FD IP P
Sbjct: 27  FHFEKCQSMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQP 86

Query: 205 DAFIYNTVIRGCLQCHYV--KDCIVMYCEMLKEGVLPNKFTFPPVIRGCSVGNGVEEGRQ 32
           DAF+YNT+I+G L    +     +++Y  ML+  VLPN FTFP ++  C     ++ G Q
Sbjct: 87  DAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIAC---RKIQHGMQ 143

Query: 31  IHGQVLKFGF 2
           IH  + KFGF
Sbjct: 144 IHAHLFKFGF 153