BLASTX nr result

ID: Cnidium21_contig00028432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028432
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523341.1| Ubiquitin ligase SINAT3, putative [Ricinus c...   337   1e-90
ref|XP_002523339.1| Ubiquitin ligase SINAT3, putative [Ricinus c...   337   1e-90
ref|XP_002321406.1| predicted protein [Populus trichocarpa] gi|1...   337   1e-90
emb|CBI23010.3| unnamed protein product [Vitis vinifera]              335   5e-90
ref|XP_002516674.1| Ubiquitin ligase SINAT3, putative [Ricinus c...   335   5e-90

>ref|XP_002523341.1| Ubiquitin ligase SINAT3, putative [Ricinus communis]
           gi|223537429|gb|EEF39057.1| Ubiquitin ligase SINAT3,
           putative [Ricinus communis]
          Length = 326

 Score =  337 bits (865), Expect = 1e-90
 Identities = 156/173 (90%), Positives = 165/173 (95%)
 Frame = -3

Query: 679 YAGSECSVVGDIPQLVTHLKEDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFNCFGQ 500
           YAGSEC+VVGDIP LV HL++DHKVDMH+GCTFNHRYVKSNPREVENATWMLTVF+CFGQ
Sbjct: 154 YAGSECAVVGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQ 213

Query: 499 YFCLHFEAFQLGMAPVYMAFLRYMGDDEDARNYSYSLEVGGNGRKLTWEGTPRSIRDSHK 320
           YFCLHFEAFQLGMAPVYMAFLR+MGD+ DARNYSYSLEVGGNGRKL WEGTPRSIRDSH+
Sbjct: 214 YFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLEVGGNGRKLIWEGTPRSIRDSHR 273

Query: 319 KVRDSHDGLIIQRNMAVFFSGGDRKELKLRVTGRIWKEQQNQESGVCIPINCS 161
           KVRDSHDGLIIQRNMA+FFSGGDRKELKLRVTGRIWKEQQNQE G CIP  CS
Sbjct: 274 KVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNQEGGACIPNLCS 326


>ref|XP_002523339.1| Ubiquitin ligase SINAT3, putative [Ricinus communis]
           gi|223537427|gb|EEF39055.1| Ubiquitin ligase SINAT3,
           putative [Ricinus communis]
          Length = 326

 Score =  337 bits (865), Expect = 1e-90
 Identities = 156/173 (90%), Positives = 165/173 (95%)
 Frame = -3

Query: 679 YAGSECSVVGDIPQLVTHLKEDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFNCFGQ 500
           YAGSEC+VVGDIP LV HL++DHKVDMH+GCTFNHRYVKSNPREVENATWMLTVF+CFGQ
Sbjct: 154 YAGSECAVVGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQ 213

Query: 499 YFCLHFEAFQLGMAPVYMAFLRYMGDDEDARNYSYSLEVGGNGRKLTWEGTPRSIRDSHK 320
           YFCLHFEAFQLGMAPVYMAFLR+MGD+ DARNYSYSLEVGGNGRKL WEGTPRSIRDSH+
Sbjct: 214 YFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLEVGGNGRKLIWEGTPRSIRDSHR 273

Query: 319 KVRDSHDGLIIQRNMAVFFSGGDRKELKLRVTGRIWKEQQNQESGVCIPINCS 161
           KVRDSHDGLIIQRNMA+FFSGGDRKELKLRVTGRIWKEQQNQE G CIP  CS
Sbjct: 274 KVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNQEGGACIPNLCS 326


>ref|XP_002321406.1| predicted protein [Populus trichocarpa] gi|118486267|gb|ABK94975.1|
           unknown [Populus trichocarpa]
           gi|222868402|gb|EEF05533.1| predicted protein [Populus
           trichocarpa]
          Length = 332

 Score =  337 bits (865), Expect = 1e-90
 Identities = 155/173 (89%), Positives = 168/173 (97%)
 Frame = -3

Query: 679 YAGSECSVVGDIPQLVTHLKEDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFNCFGQ 500
           YAGSECSVVGDIP LVTHL++DHKVDMHTGCTFNHRYVKSNPREVENATWMLTVF+CFGQ
Sbjct: 160 YAGSECSVVGDIPFLVTHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQ 219

Query: 499 YFCLHFEAFQLGMAPVYMAFLRYMGDDEDARNYSYSLEVGGNGRKLTWEGTPRSIRDSHK 320
           YFCLHFEAFQLGMAPVYMAFLR+MGD+ +ARNY+YSLEVGG+GRKLTWEGTP+S+RDSH+
Sbjct: 220 YFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYTYSLEVGGHGRKLTWEGTPQSVRDSHR 279

Query: 319 KVRDSHDGLIIQRNMAVFFSGGDRKELKLRVTGRIWKEQQNQESGVCIPINCS 161
           KVRDSHDGLIIQRNMA+FFSGGDRKELKLRVTGRIWKEQQN E+GVCIP  CS
Sbjct: 280 KVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPETGVCIPNLCS 332


>emb|CBI23010.3| unnamed protein product [Vitis vinifera]
          Length = 256

 Score =  335 bits (859), Expect = 5e-90
 Identities = 154/173 (89%), Positives = 166/173 (95%)
 Frame = -3

Query: 679 YAGSECSVVGDIPQLVTHLKEDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFNCFGQ 500
           YAGSECSVVGDIP LV+HL++DHKVDMHTGCTFNHRYVKSNPREVENATWMLTVF+CFGQ
Sbjct: 84  YAGSECSVVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQ 143

Query: 499 YFCLHFEAFQLGMAPVYMAFLRYMGDDEDARNYSYSLEVGGNGRKLTWEGTPRSIRDSHK 320
           YFCLHFEAFQLGM+PVYMAFLR+MGD+ +ARNY YSLEVG NGRKL WEGTPRSIRDSH+
Sbjct: 144 YFCLHFEAFQLGMSPVYMAFLRFMGDENEARNYGYSLEVGANGRKLIWEGTPRSIRDSHR 203

Query: 319 KVRDSHDGLIIQRNMAVFFSGGDRKELKLRVTGRIWKEQQNQESGVCIPINCS 161
           KVRDSHDGLIIQRNMA+FFSGGDRKELKLRVTGRIWKEQQNQ++GVCIP  CS
Sbjct: 204 KVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNQDAGVCIPNLCS 256


>ref|XP_002516674.1| Ubiquitin ligase SINAT3, putative [Ricinus communis]
           gi|223544169|gb|EEF45693.1| Ubiquitin ligase SINAT3,
           putative [Ricinus communis]
          Length = 346

 Score =  335 bits (859), Expect = 5e-90
 Identities = 154/173 (89%), Positives = 166/173 (95%)
 Frame = -3

Query: 679 YAGSECSVVGDIPQLVTHLKEDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFNCFGQ 500
           YAGSECSVVGDIP LV+HL++DHKVDMHTGCTFNHRYVKSNPREVENATWMLTVF+CFGQ
Sbjct: 174 YAGSECSVVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQ 233

Query: 499 YFCLHFEAFQLGMAPVYMAFLRYMGDDEDARNYSYSLEVGGNGRKLTWEGTPRSIRDSHK 320
           YFCLHFEAFQLGMAPVYMAFLR+MGD+ +ARNYSYSLEVG NGRKL WEGTPRS+RDSH+
Sbjct: 234 YFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYSYSLEVGANGRKLIWEGTPRSVRDSHR 293

Query: 319 KVRDSHDGLIIQRNMAVFFSGGDRKELKLRVTGRIWKEQQNQESGVCIPINCS 161
           KVRDSHDGLIIQRNMA+FFSGGDRKELKLRVTGRIWKEQQN E+GVC+P  CS
Sbjct: 294 KVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNSEAGVCMPNLCS 346


Top