BLASTX nr result

ID: Cnidium21_contig00028419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028419
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD10638.1| PBF68 protein [Nicotiana tabacum]                      66   3e-09
ref|XP_003553790.1| PREDICTED: uncharacterized protein LOC100800...    57   2e-06
ref|XP_003520874.1| PREDICTED: uncharacterized protein LOC100818...    57   2e-06
ref|XP_002301412.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>emb|CAD10638.1| PBF68 protein [Nicotiana tabacum]
          Length = 594

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
 Frame = +3

Query: 3   PPSWKECRVKLLKEEWLPLSKLMYTLKVEENFRTRHRSYESSTHSKPENRFVSKTTE-RK 179
           PPSWK+CR +L+ E    L  LM+ L+VE++ R R+R      + K E R  ++  +  K
Sbjct: 439 PPSWKDCRTRLMHENVPSLDMLMHHLRVEDDCRNRYR------NDKHEKRVGARKKDLSK 492

Query: 180 RLCYMCGNEGHISKNCGLHKW--VESSKGKNNADVHV 284
           + CY CG EGHISK C    +   E S G+ +  + V
Sbjct: 493 KQCYNCGKEGHISKYCTERNYQGCEKSNGRESETIPV 529


>ref|XP_003553790.1| PREDICTED: uncharacterized protein LOC100800963 [Glycine max]
          Length = 515

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 20/114 (17%)
 Frame = +3

Query: 3   PPSWKECRVKLLKEEWLPLSKLMYTLKVEENFR--------------TRHRSYESSTHSK 140
           PPSWK+  +KL++EE+LP  KLM  +++EE +R                H++Y    H +
Sbjct: 401 PPSWKDFCIKLMREEYLPYRKLMERIQIEEEYRYGVKRVVEHSNSMEGYHQAYNGG-HRR 459

Query: 141 PENRFVSKTTERKRL------CYMCGNEGHISKNCGLHKWVESSKGKNNADVHV 284
            + + +     R  +      C +CG  GH+SK+C      ++++ K+  D  +
Sbjct: 460 ADYKPLGMCRNRSEINARSVPCSVCGKRGHLSKHCWRRNDKQTNERKSEEDERI 513


>ref|XP_003520874.1| PREDICTED: uncharacterized protein LOC100818901 [Glycine max]
          Length = 558

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 20/114 (17%)
 Frame = +3

Query: 3   PPSWKECRVKLLKEEWLPLSKLMYTLKVEENFR--------------TRHRSYESSTHSK 140
           PPSWK+  +KL++EE+LP  KLM  +++EE +R                H++Y+      
Sbjct: 434 PPSWKDFCIKLMREEYLPYRKLMERIQIEEEYRYGVKRVVEYSYSMGGYHQAYKGGHRRA 493

Query: 141 PENRFVSKTTERKRL------CYMCGNEGHISKNCGLHKWVESSKGKNNADVHV 284
                +     R  +      C +CG  GH+SK+C      ++++ K+  DV +
Sbjct: 494 DYKPALGMCRNRPEIIARSVPCTVCGKRGHLSKHCWRRNDRQTNERKSEEDVRI 547


>ref|XP_002301412.1| predicted protein [Populus trichocarpa] gi|222843138|gb|EEE80685.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 20/95 (21%)
 Frame = +3

Query: 3   PPSWKECRVKLLKEEWLPLSKLMYTLKVEENFRTRHRSYESSTH---------------- 134
           PPSWK+  +KL+ EE+LP   LM  ++ EE  R + +  E S H                
Sbjct: 353 PPSWKDFCMKLMHEEYLPFWILMDRVRAEEESRNQDKLGEPSNHVHSHHPKYLGPRIRDM 412

Query: 135 SKP----ENRFVSKTTERKRLCYMCGNEGHISKNC 227
            KP    + R +     +   CY CG +GHISK+C
Sbjct: 413 KKPGLHWKRRDIEVDNNKSLTCYFCGKKGHISKHC 447


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