BLASTX nr result

ID: Cnidium21_contig00028411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028411
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM38525.1| endonuclease [Apium graveolens]                       140   8e-32
gb|AFC88012.1| PARS II endonuclease [Petroselinum crispum]            139   2e-31
ref|NP_567631.1| endonuclease 5 [Arabidopsis thaliana] gi|391359...   102   2e-20
gb|AAM65542.1| endonuclease, putative [Arabidopsis thaliana]          102   2e-20
emb|CBI18600.3| unnamed protein product [Vitis vinifera]              102   4e-20

>dbj|BAM38525.1| endonuclease [Apium graveolens]
          Length = 310

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/79 (88%), Positives = 74/79 (93%)
 Frame = -3

Query: 436 ASESIELACKFAYRNATPGITLGDEYFLSRLPVVEKRLAQAGVRLAATLNRIFTSNPINL 257
           ASESIELACKFAYRNATPG TLGDEYFLSRLPV EKRLAQAGVRLAATLNRIFTSNP +L
Sbjct: 232 ASESIELACKFAYRNATPGTTLGDEYFLSRLPVAEKRLAQAGVRLAATLNRIFTSNPSDL 291

Query: 256 TRLKVHNGGHISSNNIKIM 200
           TRL +HNGGH SSNNI+I+
Sbjct: 292 TRLNMHNGGHRSSNNIEIV 310


>gb|AFC88012.1| PARS II endonuclease [Petroselinum crispum]
          Length = 309

 Score =  139 bits (351), Expect = 2e-31
 Identities = 72/79 (91%), Positives = 74/79 (93%)
 Frame = -3

Query: 436 ASESIELACKFAYRNATPGITLGDEYFLSRLPVVEKRLAQAGVRLAATLNRIFTSNPINL 257
           ASESIELACKFAYRNATPG TLGDEYFLSRLPVVEKRLAQAGVRLAATLNRIFTS P NL
Sbjct: 232 ASESIELACKFAYRNATPGTTLGDEYFLSRLPVVEKRLAQAGVRLAATLNRIFTSKPSNL 291

Query: 256 TRLKVHNGGHISSNNIKIM 200
           TRL VHNGGH SSNNI+I+
Sbjct: 292 TRLNVHNGGH-SSNNIEIV 309


>ref|NP_567631.1| endonuclease 5 [Arabidopsis thaliana]
           gi|391359267|sp|F4JJL3.1|ENDO5_ARATH RecName:
           Full=Endonuclease 5; Short=AtENDO5; AltName:
           Full=Deoxyribonuclease ENDO5; AltName:
           Full=Single-stranded-nucleate endonuclease ENDO5; Flags:
           Precursor gi|332659079|gb|AEE84479.1| endonuclease 5
           [Arabidopsis thaliana]
          Length = 296

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/57 (85%), Positives = 54/57 (94%)
 Frame = -3

Query: 436 ASESIELACKFAYRNATPGITLGDEYFLSRLPVVEKRLAQAGVRLAATLNRIFTSNP 266
           ASESI+LACK+AYRNATPG TLGDEYFLSRLPVVEKRLAQ G+RLAATLNRIF++ P
Sbjct: 235 ASESIDLACKYAYRNATPGTTLGDEYFLSRLPVVEKRLAQGGIRLAATLNRIFSAKP 291


>gb|AAM65542.1| endonuclease, putative [Arabidopsis thaliana]
          Length = 296

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/57 (85%), Positives = 54/57 (94%)
 Frame = -3

Query: 436 ASESIELACKFAYRNATPGITLGDEYFLSRLPVVEKRLAQAGVRLAATLNRIFTSNP 266
           ASESI+LACK+AYRNATPG TLGDEYFLSRLPVVEKRLAQ G+RLAATLNRIF++ P
Sbjct: 235 ASESIDLACKYAYRNATPGTTLGDEYFLSRLPVVEKRLAQGGIRLAATLNRIFSAKP 291


>emb|CBI18600.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/57 (85%), Positives = 52/57 (91%)
 Frame = -3

Query: 436 ASESIELACKFAYRNATPGITLGDEYFLSRLPVVEKRLAQAGVRLAATLNRIFTSNP 266
           ASESI LACKFAYRNATPG TLGD+YFLSRLP+VEKRLAQ G+RLAATLNRIF S P
Sbjct: 238 ASESISLACKFAYRNATPGSTLGDDYFLSRLPIVEKRLAQGGIRLAATLNRIFASQP 294


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