BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028394
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...    67   2e-09
ref|XP_003600730.1| F-box protein SKIP19 [Medicago truncatula] g...    65   4e-09
ref|XP_003600729.1| F-box protein SKIP19 [Medicago truncatula] g...    65   6e-09
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...    65   6e-09
ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...    60   1e-07

>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 305

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/89 (37%), Positives = 57/89 (64%)
 Frame = -3

Query: 305 LVDLKIEHFPTNDLIEFLAQGERSSQLRRLQISHCYGSLHKFWSDFFKKAPLLEEIALTF 126
           L+ + IE+F T+ LI+++A  +RSS L+RL++   Y      +S   KK PLLEE+ +++
Sbjct: 93  LISISIEYFATDSLIKYIA--DRSSHLKRLRLLSSYTLSDAAFSKAAKKFPLLEELDISY 150

Query: 125 TTISEETVAGISQNCPMLKSFTYNNNGWK 39
            ++S E + G+  +CP+L+S   N  G+K
Sbjct: 151 CSLSTEALVGVGISCPLLRSLKLNCQGYK 179


>ref|XP_003600730.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355489778|gb|AES70981.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 307

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/82 (40%), Positives = 55/82 (67%)
 Frame = -3

Query: 299 DLKIEHFPTNDLIEFLAQGERSSQLRRLQISHCYGSLHKFWSDFFKKAPLLEEIALTFTT 120
           ++ +E+F T+DLI  LA  ER+S LRR++IS C    +  ++   KK  LLEE+ L+FT+
Sbjct: 96  EINVEYFVTDDLIRRLA--ERTSNLRRIRISKCLEISNTVFTIVAKKFSLLEELELSFTS 153

Query: 119 ISEETVAGISQNCPMLKSFTYN 54
           ++  ++  I +NCP+LK+  +N
Sbjct: 154 LNHVSLEAIGKNCPLLKTLKFN 175


>ref|XP_003600729.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355489777|gb|AES70980.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 370

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/82 (40%), Positives = 55/82 (67%)
 Frame = -3

Query: 299 DLKIEHFPTNDLIEFLAQGERSSQLRRLQISHCYGSLHKFWSDFFKKAPLLEEIALTFTT 120
           ++ +E+F T+DLI  LA  ER+S LRR++IS C    +  ++   KK  LLEE+ L+FT+
Sbjct: 96  EINVEYFVTDDLIRRLA--ERTSNLRRIRISKCLEISNTVFTIAAKKFSLLEELELSFTS 153

Query: 119 ISEETVAGISQNCPMLKSFTYN 54
           ++  ++  I +NCP+LK+  +N
Sbjct: 154 LNHVSLEAIGKNCPLLKTLKFN 175


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/91 (37%), Positives = 55/91 (60%)
 Frame = -3

Query: 308 QLVDLKIEHFPTNDLIEFLAQGERSSQLRRLQISHCYGSLHKFWSDFFKKAPLLEEIALT 129
           QL+ + I+ F T++L+ ++   +RSS +R L++  CYG      S+  K+ PLL EI L 
Sbjct: 93  QLLSICIDDFATDNLLNYII--DRSSHIRHLRLVSCYGISDDGLSEGIKRLPLLVEIDLC 150

Query: 128 FTTISEETVAGISQNCPMLKSFTYNNNGWKY 36
           + + S+E +  I Q CP LKSF  N  G+++
Sbjct: 151 YCSFSKEVLEAIGQCCPRLKSFRLNCQGFRH 181


>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/90 (35%), Positives = 51/90 (56%)
 Frame = -3

Query: 308 QLVDLKIEHFPTNDLIEFLAQGERSSQLRRLQISHCYGSLHKFWSDFFKKAPLLEEIALT 129
           QL+   IEHF T+DL+ ++ Q    +QL RL++ +C     +   +   K PLLE++ L+
Sbjct: 90  QLIHFNIEHFGTDDLLLYITQS--CNQLSRLRLVYCNRISDEGLVEAVSKLPLLEDLELS 147

Query: 128 FTTISEETVAGISQNCPMLKSFTYNNNGWK 39
           F +   ET+  + QNCP LKS   N   ++
Sbjct: 148 FCSFDVETLETLGQNCPGLKSLKLNRQFYR 177