BLASTX nr result

ID: Cnidium21_contig00028352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028352
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34676.3| unnamed protein product [Vitis vinifera]              256   3e-66
ref|XP_002269986.1| PREDICTED: putative Holliday junction resolv...   256   3e-66
ref|XP_002298037.1| predicted protein [Populus trichocarpa] gi|2...   248   1e-63
gb|ADL36700.1| GRF domain class transcription factor [Malus x do...   242   7e-62
ref|XP_002509795.1| conserved hypothetical protein [Ricinus comm...   235   8e-60

>emb|CBI34676.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  256 bits (655), Expect = 3e-66
 Identities = 122/162 (75%), Positives = 143/162 (88%)
 Frame = +1

Query: 151 MKYVRPINLFQDLLKLNASQRGRFLGLDVGDKYVGLAVSDYHNQIASPLRVLLRKKSNID 330
           MKYV+P+NLF DLLK+ A++RGR LGLDVGDKYVGLAVSD HN+IASPL VLLRKKSNID
Sbjct: 56  MKYVKPVNLFHDLLKMKATERGRLLGLDVGDKYVGLAVSDLHNKIASPLSVLLRKKSNID 115

Query: 331 LMATDFQSLRSELSLSGFIFGYPFYRSKNSPDAIQVKLFVEDLCKTGVLEGLRYTFWDEC 510
           LMATDFQSL S+LSL+GFI GYPF R ++SP A+ VK+F++DLCKTG LEG+RYT+WDEC
Sbjct: 116 LMATDFQSLISDLSLAGFIVGYPFNRQRSSPTAVNVKVFIDDLCKTGKLEGVRYTYWDEC 175

Query: 511 FTSKITELLIKDLNMHPVQYKSAMDKFAAVGILQGYLDFANK 636
           FTSK  ELL+K LN+HPVQ K+ +DKFAAVGILQGYLD  N+
Sbjct: 176 FTSKNVELLLKPLNLHPVQSKTILDKFAAVGILQGYLDHVNR 217


>ref|XP_002269986.1| PREDICTED: putative Holliday junction resolvase [Vitis vinifera]
          Length = 169

 Score =  256 bits (655), Expect = 3e-66
 Identities = 122/162 (75%), Positives = 143/162 (88%)
 Frame = +1

Query: 151 MKYVRPINLFQDLLKLNASQRGRFLGLDVGDKYVGLAVSDYHNQIASPLRVLLRKKSNID 330
           MKYV+P+NLF DLLK+ A++RGR LGLDVGDKYVGLAVSD HN+IASPL VLLRKKSNID
Sbjct: 1   MKYVKPVNLFHDLLKMKATERGRLLGLDVGDKYVGLAVSDLHNKIASPLSVLLRKKSNID 60

Query: 331 LMATDFQSLRSELSLSGFIFGYPFYRSKNSPDAIQVKLFVEDLCKTGVLEGLRYTFWDEC 510
           LMATDFQSL S+LSL+GFI GYPF R ++SP A+ VK+F++DLCKTG LEG+RYT+WDEC
Sbjct: 61  LMATDFQSLISDLSLAGFIVGYPFNRQRSSPTAVNVKVFIDDLCKTGKLEGVRYTYWDEC 120

Query: 511 FTSKITELLIKDLNMHPVQYKSAMDKFAAVGILQGYLDFANK 636
           FTSK  ELL+K LN+HPVQ K+ +DKFAAVGILQGYLD  N+
Sbjct: 121 FTSKNVELLLKPLNLHPVQSKTILDKFAAVGILQGYLDHVNR 162


>ref|XP_002298037.1| predicted protein [Populus trichocarpa] gi|222845295|gb|EEE82842.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  248 bits (632), Expect = 1e-63
 Identities = 121/162 (74%), Positives = 141/162 (87%)
 Frame = +1

Query: 151 MKYVRPINLFQDLLKLNASQRGRFLGLDVGDKYVGLAVSDYHNQIASPLRVLLRKKSNID 330
           MKYVRP++LF +LLK +A  +GRFLGLDVGDKYVGLAVSD  N+IASPL VLLRKKSNI+
Sbjct: 1   MKYVRPLSLFHELLKTSAINQGRFLGLDVGDKYVGLAVSDPLNKIASPLSVLLRKKSNIE 60

Query: 331 LMATDFQSLRSELSLSGFIFGYPFYRSKNSPDAIQVKLFVEDLCKTGVLEGLRYTFWDEC 510
           LMATDFQSL SELSL GFI GYPF R + +PDA++VKLFV+DLCKTG LEG+++T+WDEC
Sbjct: 61  LMATDFQSLISELSLGGFIVGYPFDRQRGAPDAVRVKLFVDDLCKTGKLEGVKFTYWDEC 120

Query: 511 FTSKITELLIKDLNMHPVQYKSAMDKFAAVGILQGYLDFANK 636
           FTSK  ELL+K L++HPV  KS MDKFAAVGILQGYLD+ NK
Sbjct: 121 FTSKNVELLVKPLDLHPVHAKSIMDKFAAVGILQGYLDYVNK 162


>gb|ADL36700.1| GRF domain class transcription factor [Malus x domestica]
          Length = 170

 Score =  242 bits (617), Expect = 7e-62
 Identities = 120/162 (74%), Positives = 137/162 (84%)
 Frame = +1

Query: 151 MKYVRPINLFQDLLKLNASQRGRFLGLDVGDKYVGLAVSDYHNQIASPLRVLLRKKSNID 330
           M+YV+P+NLFQDLLK N  +RGR LGLDVGDKYVG+AVSD HN+IASPL VLLRKKSNI 
Sbjct: 1   MRYVKPLNLFQDLLKANTLERGRLLGLDVGDKYVGVAVSDLHNKIASPLSVLLRKKSNIG 60

Query: 331 LMATDFQSLRSELSLSGFIFGYPFYRSKNSPDAIQVKLFVEDLCKTGVLEGLRYTFWDEC 510
           LMA DFQSL SELSL GFI GYPF R K +PDA+QVKLF++DL KT  LEGL+YT+WDE 
Sbjct: 61  LMAADFQSLISELSLVGFIVGYPFDRQKGTPDAVQVKLFIDDLSKTRKLEGLKYTYWDEG 120

Query: 511 FTSKITELLIKDLNMHPVQYKSAMDKFAAVGILQGYLDFANK 636
           FTSK  ELL+K LN+ PVQ K+ MDKFAAVGILQGYLD+ N+
Sbjct: 121 FTSKNVELLLKPLNLPPVQSKTIMDKFAAVGILQGYLDYVNR 162


>ref|XP_002509795.1| conserved hypothetical protein [Ricinus communis]
           gi|223549694|gb|EEF51182.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 168

 Score =  235 bits (599), Expect = 8e-60
 Identities = 114/162 (70%), Positives = 138/162 (85%)
 Frame = +1

Query: 151 MKYVRPINLFQDLLKLNASQRGRFLGLDVGDKYVGLAVSDYHNQIASPLRVLLRKKSNID 330
           MKY++PI LF DL+K  +   GR LGLDVGDKYVGLA+SD HN+IASPL VLLRKKSNID
Sbjct: 1   MKYMKPIALFNDLMK--SKSNGRLLGLDVGDKYVGLAISDRHNKIASPLSVLLRKKSNID 58

Query: 331 LMATDFQSLRSELSLSGFIFGYPFYRSKNSPDAIQVKLFVEDLCKTGVLEGLRYTFWDEC 510
           L+ATDFQSL SELSL+GF+ GYPF R +++PDA+ VKLF++DL K G LEGL+YTFWDEC
Sbjct: 59  LVATDFQSLISELSLAGFVVGYPFDRQRSTPDALHVKLFIDDLRKIGKLEGLKYTFWDEC 118

Query: 511 FTSKITELLIKDLNMHPVQYKSAMDKFAAVGILQGYLDFANK 636
           FTSK  ELL++ L++HPV+ K+ MDKFAAVGILQGYLD+ N+
Sbjct: 119 FTSKNVELLVQPLDLHPVEAKTIMDKFAAVGILQGYLDYVNR 160


Top