BLASTX nr result

ID: Cnidium21_contig00028327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028327
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFZ78610.1| helix-loop-helix protein [Populus tomentosa]           112   2e-23
ref|XP_002328413.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002319028.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
gb|ABK92747.1| unknown [Populus trichocarpa]                          111   5e-23
ref|XP_002512342.1| DNA binding protein, putative [Ricinus commu...   109   2e-22

>gb|AFZ78610.1| helix-loop-helix protein [Populus tomentosa]
          Length = 343

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/79 (70%), Positives = 70/79 (88%)
 Frame = +2

Query: 5   MVENHANMKIRSKSRPRQLLKLVHELQILRLTILHLSITSLDQIVLYSLSVKVEDDCKLN 184
           MVE+HAN+KIRSK RP+QLLK+V  L  +RLT+LHL++T++DQIVLYSLSVKVEDDCKL+
Sbjct: 260 MVESHANLKIRSKRRPKQLLKVVSGLHSMRLTVLHLNVTTVDQIVLYSLSVKVEDDCKLS 319

Query: 185 SGEEIATAVNQILAKIQME 241
           S +EIATAV Q+L +IQ E
Sbjct: 320 SVDEIATAVYQMLGRIQEE 338


>ref|XP_002328413.1| predicted protein [Populus trichocarpa] gi|222838128|gb|EEE76493.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/79 (70%), Positives = 69/79 (87%)
 Frame = +2

Query: 5   MVENHANMKIRSKSRPRQLLKLVHELQILRLTILHLSITSLDQIVLYSLSVKVEDDCKLN 184
           MVE+HAN+KIRSK RP+QLLK+V  L  +RLT+LHL++T++DQIVLYSLSVKVEDDCKL 
Sbjct: 106 MVESHANLKIRSKRRPKQLLKVVSGLHSMRLTVLHLNVTTVDQIVLYSLSVKVEDDCKLT 165

Query: 185 SGEEIATAVNQILAKIQME 241
           S +EIATAV Q+L +IQ E
Sbjct: 166 SVDEIATAVYQMLGRIQEE 184


>ref|XP_002319028.1| predicted protein [Populus trichocarpa] gi|222857404|gb|EEE94951.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/79 (69%), Positives = 70/79 (88%)
 Frame = +2

Query: 5   MVENHANMKIRSKSRPRQLLKLVHELQILRLTILHLSITSLDQIVLYSLSVKVEDDCKLN 184
           MVE+HAN+KIRSK RP+QLLK+V  L  +RLT+LHL+++++DQIVLYSLSVKVEDDCKL+
Sbjct: 106 MVESHANLKIRSKRRPKQLLKVVSALHSMRLTVLHLNVSTVDQIVLYSLSVKVEDDCKLS 165

Query: 185 SGEEIATAVNQILAKIQME 241
           S +EIATAV Q+L +IQ E
Sbjct: 166 SVDEIATAVYQMLGRIQEE 184


>gb|ABK92747.1| unknown [Populus trichocarpa]
          Length = 97

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/79 (69%), Positives = 70/79 (88%)
 Frame = +2

Query: 5   MVENHANMKIRSKSRPRQLLKLVHELQILRLTILHLSITSLDQIVLYSLSVKVEDDCKLN 184
           MVE+HAN+KIRSK RP+QLLK+V  L  +RLT+LHL+++++DQIVLYSLSVKVEDDCKL+
Sbjct: 14  MVESHANLKIRSKRRPKQLLKVVSALHSMRLTVLHLNVSTVDQIVLYSLSVKVEDDCKLS 73

Query: 185 SGEEIATAVNQILAKIQME 241
           S +EIATAV Q+L +IQ E
Sbjct: 74  SVDEIATAVYQMLGRIQEE 92


>ref|XP_002512342.1| DNA binding protein, putative [Ricinus communis]
           gi|223548303|gb|EEF49794.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 366

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/79 (69%), Positives = 68/79 (86%)
 Frame = +2

Query: 5   MVENHANMKIRSKSRPRQLLKLVHELQILRLTILHLSITSLDQIVLYSLSVKVEDDCKLN 184
           MVE+HAN+KIRSK RP+QLLK+V  L  LRLTILHL++T+ +QIVLY LSVKVEDDCKL+
Sbjct: 283 MVESHANLKIRSKRRPKQLLKVVSGLHTLRLTILHLNVTTTEQIVLYCLSVKVEDDCKLS 342

Query: 185 SGEEIATAVNQILAKIQME 241
           S +EIATAV Q+L +IQ +
Sbjct: 343 SVDEIATAVYQMLGRIQQD 361


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