BLASTX nr result

ID: Cnidium21_contig00028319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028319
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...   130   2e-28
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   125   8e-27
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   112   7e-23
ref|XP_002328401.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus c...   110   3e-22

>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score =  130 bits (328), Expect = 2e-28
 Identities = 82/216 (37%), Positives = 110/216 (50%), Gaps = 8/216 (3%)
 Frame = +3

Query: 3   NPSTNQLAILPK----HPAHTWPLIHCIGLAFDPSKSLHYKVVAFYTSKAASIGDFHI-- 164
           NP+T Q+  LP       A +   +  + LAFDP KS +YKV+    S   SI  + I  
Sbjct: 128 NPTTKQMFTLPSLVGDANAASPTTLFGLNLAFDPLKSCNYKVICV-RSTTNSIYQYQIET 186

Query: 165 YSSETGTWRLAVQSFFRSPDMELDIGVFWHGCIHWLGDLNLESVPGSTLSDCLYFNVDEC 344
           Y SE   WRL+   F    DM  D GVFW+G IHW+          S   + +YF++D  
Sbjct: 187 YQSEIAAWRLSGLPFVAPFDMVFDNGVFWNGAIHWI----------SATGNAIYFDMDRE 236

Query: 345 RLGTFPRPPFDMKWSSIR-SYFGESEDHLHFIGV-GPSVTSLSVYEMKSDYSEWFIKYWI 518
            + + P+ PF  +W   R  YFGES+ HLH I + G   T  +VYEM+ DYS W I+Y +
Sbjct: 237 CISSMPKLPFSYEWGKRRFRYFGESDGHLHLIEIYGLRTTQFNVYEMEKDYSFWRIRYRV 296

Query: 519 DLAPISKVFPEMTESKARYHLGNNYAVAVLSLIRRE 626
            L  +   FPEM  S       N YA  VLSL+  +
Sbjct: 297 QLDHVVAAFPEMVRSYLDAGDSNYYAFVVLSLVEED 332


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  125 bits (313), Expect = 8e-27
 Identities = 82/212 (38%), Positives = 111/212 (52%), Gaps = 6/212 (2%)
 Frame = +3

Query: 3   NPSTNQLAILPKHPAHTW--PLIHCIGLAFDPSKSLHYKVVAFYTSKAA-SIGDFHIYSS 173
           N +T + ++LP  P  +     +  I LAFDPSKS +Y V+   + + + S     IYSS
Sbjct: 149 NLATRRFSVLPP-PCSSGGRDTVFGINLAFDPSKSPYYSVICVRSCEVSISHYQIEIYSS 207

Query: 174 ETGTWRLAVQSFFRSPDMELDIGVFWHGCIHWLGDLNLESVPGSTLSDCLYFNVDECRLG 353
            TG WRL+ + F    DM    GVFW+G +HW+          S     LYF +DE R+ 
Sbjct: 208 GTGDWRLSGKPFRAPFDMVFYDGVFWNGAVHWI----------SPSGASLYFGIDEGRID 257

Query: 354 TFPRPPFDMK-WSSIR-SYFGESEDHLHFIGV-GPSVTSLSVYEMKSDYSEWFIKYWIDL 524
           T P PP     W   R  +FGES  HLH I + GP  T   VYEM+ DYS W +++ +DL
Sbjct: 258 TMPPPPPGPGGWGKRRIRHFGESGGHLHIIEIYGPRTTQFVVYEMERDYSNWGVRFSVDL 317

Query: 525 APISKVFPEMTESKARYHLGNNYAVAVLSLIR 620
             +   FPE+T++    H    YA  VL LIR
Sbjct: 318 DKVIAAFPEITQNYLDAHDLYYYAYNVLCLIR 349


>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score =  112 bits (279), Expect = 7e-23
 Identities = 76/214 (35%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
 Frame = +3

Query: 3   NPSTNQLAILPKHPAHTWPLIHCIGLAFDPSKSLHYKVVAFYTSKAA-SIGDFHIYSSET 179
           NP+T Q   LP     +   +  + LAFDPSKS  YKVV     K++       I S ET
Sbjct: 124 NPTTKQFTTLPPLCGRSVRRVLGVNLAFDPSKSHTYKVVCVQRCKSSYDHCQIQISSLET 183

Query: 180 GTWRLAVQSFFRSPDMELDIGVFWHGCIHWLGDLNLESVPGSTLSDCLYFNVDECRLGTF 359
           G WR++   F     ++   GV+W+G IHW+          S     LYF+++E  +   
Sbjct: 184 GPWRVSGVPFAAPISVDFPSGVYWNGAIHWI----------SPREASLYFDLNEELVREM 233

Query: 360 PRPPF--DMKWSSIRSYFGESEDHLHFIGV-GPSVTSLSVYEMKSDYSEWFIKYWIDLAP 530
           P PP   D     IR  FGES  HLH + +   S T  +VYEM+ D+S WF+K+ +DL  
Sbjct: 234 PMPPVPDDSNERGIRC-FGESCGHLHLVEIYESSTTQFNVYEMERDHSGWFVKFRVDLNG 292

Query: 531 ISKVFPEMTESKARYH--LGNNYAVAVLSLIRRE 626
           ++  FP + E    YH      Y+ +VL ++RRE
Sbjct: 293 VALAFPGIIEG---YHEEYDYMYSFSVLCIVRRE 323


>ref|XP_002328401.1| predicted protein [Populus trichocarpa] gi|222838116|gb|EEE76481.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score =  110 bits (275), Expect = 2e-22
 Identities = 74/213 (34%), Positives = 101/213 (47%), Gaps = 4/213 (1%)
 Frame = +3

Query: 3   NPSTNQLAILPKHPAHTWPLIH---CIGLAFDPSKSLHYKVVAFYTSKAASIGDFHIYSS 173
           NP+TN    +  HP H +   H    + LAFDP KS +YKVV FY   +       +YSS
Sbjct: 209 NPTTNHFKRI-SHPVHKFDEFHHPPVLCLAFDPLKSFNYKVVCFYQVVSGGY-QIDVYSS 266

Query: 174 ETGTWRLAVQSFFRSPDMELDIGVFWHGCIHWLGDLNLESVPGSTLSDCLYFNVDECRLG 353
           ETG+W      F   P +++   VF +  IHW           S   +  YF+V    + 
Sbjct: 267 ETGSWGFNQIPFVNPPSLKIHEWVFCNDAIHWC----------SLEENSQYFDVSSESVN 316

Query: 354 TFPRPPFDMKWSSIRSYFGESEDHLHF-IGVGPSVTSLSVYEMKSDYSEWFIKYWIDLAP 530
             P PP   +     +YFG S  HLH  +G+   V    ++E+K DYS WFIKY +DL  
Sbjct: 317 ILPMPP---RGKLDITYFGGSRGHLHMGVGISRLVLEFDIWELKEDYSGWFIKYHLDLHS 373

Query: 531 ISKVFPEMTESKARYHLGNNYAVAVLSLIRREN 629
           + +V            L N   ++VLSLIR EN
Sbjct: 374 MRRV------------LANRCPLSVLSLIRAEN 394


>ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus communis]
           gi|223550115|gb|EEF51602.1| hypothetical protein
           RCOM_1501190 [Ricinus communis]
          Length = 332

 Score =  110 bits (274), Expect = 3e-22
 Identities = 71/188 (37%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
 Frame = +3

Query: 81  AFDPSKSLHYKVVAFYTSKAASIGDFHI--YSSETGTWRLAVQSF-FRSPDMELDIGVFW 251
           AFDP++S HYKV+     + +   D+HI  YSS+TG WR+   SF   + D     GVFW
Sbjct: 95  AFDPARSRHYKVICTCQYEISE-PDYHIAVYSSKTGLWRVTAASFTLDNMDFGFYGGVFW 153

Query: 252 HGCIHWLGDLNLESVPGSTLSDCLYFNVDECRLGTFPRPPFDMKWSSIRS-YFGESEDHL 428
           +G IHW  D        S  S C  F+VD+ ++   P PP    W   R  YFGES  HL
Sbjct: 154 NGAIHWYTD--------SGPSFC--FDVDQEQIREMPMPPIPDDWYRRRVIYFGESGGHL 203

Query: 429 HFIGV-GPSVTSLSVYEMKSDYSEWFIKYWIDLAPISKVFPEMTESKARYHLGNNYAVAV 605
           + I +   + T  +V E+  DYS WF+KY I+L  +   FPEM +++    + N YA  +
Sbjct: 204 NLIEIYHHAATQFNVCELAKDYSGWFVKYRIELEEVIIAFPEMIKTQFEPTVLNYYAYEI 263

Query: 606 LSLIRREN 629
             ++R E+
Sbjct: 264 WCIVRGES 271


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