BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028254
         (1128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi...   462   e-128
emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]   460   e-127
ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containi...   444   e-122
ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|2...   443   e-122
ref|XP_002519054.1| pentatricopeptide repeat-containing protein,...   431   e-118

>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
            mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  462 bits (1190), Expect = e-128
 Identities = 217/345 (62%), Positives = 271/345 (78%)
 Frame = -1

Query: 1035 RNYITQRCYYTNRVNKETLYTKISPLGNPNLDLTPELDNWIQKGNKVRFAELQRIVLDFR 856
            +N I+ R YYT+R  K +LY KISPLG+PN  + PELDNW+Q GNKV  AELQRI+ D R
Sbjct: 23   KNPISNRTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLR 82

Query: 855  RRKRYSQALQVSEWMNSRRVCVFTPTEHAIHLDLIGKVHGFVNAERYFMSLNEQDKIDKT 676
            +RKR+SQAL++SEWM+ + +C F+PTEHA+ LDLIG+V GF++AE YF SL   DK DKT
Sbjct: 83   KRKRFSQALEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKT 142

Query: 675  YGALLHCYVRQRQTDKALSHLQKMKELGVALSPLAYNDIMSLYSSAGQHEKTYEVLTDMK 496
            YGALL+CYVRQRQTDK+LSHLQKMKE+G A SPL YNDIM LY++ GQHEK  +VLT+MK
Sbjct: 143  YGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMK 202

Query: 495  KDGITPDIFSYKICINSYGVMSNYEGMERVLKEMESQPHIVMDWVAYATVGNHFITAGRK 316
            +  + PD FSY+ICINSYG  S+ +GME VLKEME QPHIVMDW  YA   N +I AG  
Sbjct: 203  QSNVYPDNFSYRICINSYGAQSDIQGMENVLKEMERQPHIVMDWNTYAVAANFYIKAGLP 262

Query: 315  DKANIALNKAEAFLDSKNGIGHNHLITLHARLGNTSDVFRMWDLMKSACKRCINKDYIVM 136
            DKA  AL K+E  LD ++G+G+NHLI+L+A LGN ++V R+W L KSACKR IN+DYI M
Sbjct: 263  DKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITM 322

Query: 135  LDTLAKLGEFTKAEELIEEWEASGNCYDFRVQNALIIGYCNARLY 1
            L++L +LGE  +AE+++ EWE+SGNCYDFRV N +IIGY    L+
Sbjct: 323  LESLVRLGELEEAEKVLREWESSGNCYDFRVPNIVIIGYSEKGLF 367


>emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
          Length = 506

 Score =  460 bits (1184), Expect = e-127
 Identities = 216/345 (62%), Positives = 271/345 (78%)
 Frame = -1

Query: 1035 RNYITQRCYYTNRVNKETLYTKISPLGNPNLDLTPELDNWIQKGNKVRFAELQRIVLDFR 856
            +N I+ R YYT+R  K +LY KISPLG+PN  + PELDNW+Q GNKV  AELQRI+ D R
Sbjct: 23   KNPISNRTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLR 82

Query: 855  RRKRYSQALQVSEWMNSRRVCVFTPTEHAIHLDLIGKVHGFVNAERYFMSLNEQDKIDKT 676
            +RKR+SQAL++SEWM+ + +C F+PTEHA+ LDLIG+V GF++AE YF SL   DK DKT
Sbjct: 83   KRKRFSQALEISEWMSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKT 142

Query: 675  YGALLHCYVRQRQTDKALSHLQKMKELGVALSPLAYNDIMSLYSSAGQHEKTYEVLTDMK 496
            YGALL+CYVRQRQTDK+LSHLQKMKE+G A SPL YNDIM LY++ GQHEK  +VLT+MK
Sbjct: 143  YGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMK 202

Query: 495  KDGITPDIFSYKICINSYGVMSNYEGMERVLKEMESQPHIVMDWVAYATVGNHFITAGRK 316
            +  + PD FSY+ICINSY   S+ +GME+VLKEME QPHIVMDW  YA   N +I AG  
Sbjct: 203  QSHVYPDNFSYRICINSYAAQSDIQGMEKVLKEMERQPHIVMDWNTYAVAANFYIKAGLP 262

Query: 315  DKANIALNKAEAFLDSKNGIGHNHLITLHARLGNTSDVFRMWDLMKSACKRCINKDYIVM 136
            DKA  AL K+E  LD ++G+G+NHLI+L+A LGN ++V R+W L KSACKR IN+DYI M
Sbjct: 263  DKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITM 322

Query: 135  LDTLAKLGEFTKAEELIEEWEASGNCYDFRVQNALIIGYCNARLY 1
            L++L +LGE  +AE+++ EWE+SGNCYDFRV N +IIGY    L+
Sbjct: 323  LESLVRLGELEEAEKVLREWESSGNCYDFRVPNIVIIGYSEKGLF 367


>ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
            mitochondrial-like [Glycine max]
          Length = 486

 Score =  444 bits (1141), Expect = e-122
 Identities = 207/342 (60%), Positives = 273/342 (79%)
 Frame = -1

Query: 1026 ITQRCYYTNRVNKETLYTKISPLGNPNLDLTPELDNWIQKGNKVRFAELQRIVLDFRRRK 847
            +  R YYT+R  K +LY+KISPLGNPN  + P LD+W+ KGNK+R AELQRI+ D R+R 
Sbjct: 8    VVSRSYYTSRSKKPSLYSKISPLGNPNTSVVPVLDDWVFKGNKLRVAELQRIIRDLRKRS 67

Query: 846  RYSQALQVSEWMNSRRVCVFTPTEHAIHLDLIGKVHGFVNAERYFMSLNEQDKIDKTYGA 667
            R+SQALQ+SEWM+++ VC+F+PTE+A+HLDLIGKVHGF +AE YF +L +Q K +KTYGA
Sbjct: 68   RFSQALQISEWMHNKGVCIFSPTEYAVHLDLIGKVHGFSSAETYFDALKDQHKTNKTYGA 127

Query: 666  LLHCYVRQRQTDKALSHLQKMKELGVALSPLAYNDIMSLYSSAGQHEKTYEVLTDMKKDG 487
            LL+CYVRQRQTDKALSHLQKMK+LG A SPL YNDIM LY++ GQHEK  +VL +MK++ 
Sbjct: 128  LLNCYVRQRQTDKALSHLQKMKDLGFASSPLTYNDIMCLYTNIGQHEKVPDVLREMKQNQ 187

Query: 486  ITPDIFSYKICINSYGVMSNYEGMERVLKEMESQPHIVMDWVAYATVGNHFITAGRKDKA 307
            + PD FSY+ICINSYGV S++ G+ERVLKEME+QP+IVMDW  Y+   N +I AG    A
Sbjct: 188  VLPDNFSYRICINSYGVRSDFGGVERVLKEMETQPNIVMDWNTYSIAANFYIKAGLTRDA 247

Query: 306  NIALNKAEAFLDSKNGIGHNHLITLHARLGNTSDVFRMWDLMKSACKRCINKDYIVMLDT 127
              AL K+E  LD+K+G G+NHLI+L+A+LG  ++V R+WDL K+ACKRCIN+D+  +L++
Sbjct: 248  VCALRKSEERLDNKDGQGYNHLISLYAQLGLKNEVMRIWDLEKNACKRCINRDFTTLLES 307

Query: 126  LAKLGEFTKAEELIEEWEASGNCYDFRVQNALIIGYCNARLY 1
            L KLGE  +AE++++EWE+S NCYDF + + +IIGY    L+
Sbjct: 308  LVKLGELDEAEKILKEWESSDNCYDFGIPSIVIIGYSQKGLH 349


>ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|222848105|gb|EEE85652.1|
            predicted protein [Populus trichocarpa]
          Length = 492

 Score =  443 bits (1139), Expect = e-122
 Identities = 211/354 (59%), Positives = 279/354 (78%), Gaps = 1/354 (0%)
 Frame = -1

Query: 1077 LKMRRMNETLITNLRNYITQRCYYTNRVNKETLYTKISPLGN-PNLDLTPELDNWIQKGN 901
            +  + +++TLI N +N I  R YYTN+ NK TLY+KISPLG+ P+L+  PELD+W++ GN
Sbjct: 1    MNTKLISKTLIQN-QNTIITRSYYTNKANKATLYSKISPLGSTPSLE--PELDSWVRSGN 57

Query: 900  KVRFAELQRIVLDFRRRKRYSQALQVSEWMNSRRVCVFTPTEHAIHLDLIGKVHGFVNAE 721
            KVR AELQRI+ D R+RKR+S ALQVSEWM+ + +C+F+P+EHA+ LDLIG+VHGFV+AE
Sbjct: 58   KVRVAELQRIIHDLRKRKRFSHALQVSEWMHKKDICIFSPSEHAVQLDLIGRVHGFVSAE 117

Query: 720  RYFMSLNEQDKIDKTYGALLHCYVRQRQTDKALSHLQKMKELGVALSPLAYNDIMSLYSS 541
             YF +L +QDK +KTYGALL+CYVRQR+TDK++ HLQKMKE+G A S L YNDIM LY++
Sbjct: 118  NYFNNLRDQDKNEKTYGALLNCYVRQRETDKSILHLQKMKEMGFAKSSLTYNDIMCLYTN 177

Query: 540  AGQHEKTYEVLTDMKKDGITPDIFSYKICINSYGVMSNYEGMERVLKEMESQPHIVMDWV 361
             GQHEK  +VL +MK++ + PD FSY++CINS+G   + EGME++L EME QP IVMDW 
Sbjct: 178  VGQHEKVPQVLNEMKENNVLPDNFSYRLCINSFGARDDLEGMEKILNEMEHQPDIVMDWN 237

Query: 360  AYATVGNHFITAGRKDKANIALNKAEAFLDSKNGIGHNHLITLHARLGNTSDVFRMWDLM 181
             YA   N +I     DKA   L K+EA LD K+G G+NHLI+L+A+LGN ++V R+WDL 
Sbjct: 238  TYAVAANFYIIGDLTDKAIDTLKKSEARLDKKDGTGYNHLISLYAKLGNKTEVLRLWDLE 297

Query: 180  KSACKRCINKDYIVMLDTLAKLGEFTKAEELIEEWEASGNCYDFRVQNALIIGY 19
            KSAC+R INKDYI+M+++L KL EF +AE++++EWE+SGN YD RV N LIIGY
Sbjct: 298  KSACERHINKDYIIMMESLLKLSEFEEAEKMLKEWESSGNFYDVRVPNTLIIGY 351


>ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223541717|gb|EEF43265.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 485

 Score =  431 bits (1108), Expect = e-118
 Identities = 203/339 (59%), Positives = 262/339 (77%)
 Frame = -1

Query: 1017 RCYYTNRVNKETLYTKISPLGNPNLDLTPELDNWIQKGNKVRFAELQRIVLDFRRRKRYS 838
            R YY NR  K TLY+KISPLG+PN  L PELDNW+Q GNKVR  ELQRI+ D R+R R++
Sbjct: 4    RYYYANRTKKVTLYSKISPLGDPNTSLVPELDNWVQDGNKVRVGELQRIIRDLRKRNRFT 63

Query: 837  QALQVSEWMNSRRVCVFTPTEHAIHLDLIGKVHGFVNAERYFMSLNEQDKIDKTYGALLH 658
            QAL+VSEWMN + +C+F+ TEHA+ LDLIGKV GF++AE YF +L + DK DKTYGALL+
Sbjct: 64   QALEVSEWMNKKGICIFSSTEHAVQLDLIGKVRGFLSAENYFNNLMDHDKTDKTYGALLN 123

Query: 657  CYVRQRQTDKALSHLQKMKELGVALSPLAYNDIMSLYSSAGQHEKTYEVLTDMKKDGITP 478
            CYVRQRQTD+++SH QKMKE+G+A SPLAYNDIM LY + G +EK   VLT+MK++ I+P
Sbjct: 124  CYVRQRQTDRSISHWQKMKEMGLASSPLAYNDIMCLYINLGLYEKVLHVLTEMKENKISP 183

Query: 477  DIFSYKICINSYGVMSNYEGMERVLKEMESQPHIVMDWVAYATVGNHFITAGRKDKANIA 298
            D FSY+ICINSYG  S+ +GME+VL EME +    MDW  YA V N +I AG  DKA  A
Sbjct: 184  DNFSYRICINSYGARSDIQGMEKVLNEMECRLGNAMDWNTYAVVANFYIKAGLADKAVDA 243

Query: 297  LNKAEAFLDSKNGIGHNHLITLHARLGNTSDVFRMWDLMKSACKRCINKDYIVMLDTLAK 118
            L K+E  LD K+GIG+NHLI+L+A LG  S+V R+WDL KS CKR IN+D++ ML++L K
Sbjct: 244  LRKSEEKLDKKDGIGYNHLISLYATLGIKSEVLRIWDLQKSVCKRRINRDFVTMLESLVK 303

Query: 117  LGEFTKAEELIEEWEASGNCYDFRVQNALIIGYCNARLY 1
            LG+  +AE++++EWE+SGN YD R+ N +++GY    L+
Sbjct: 304  LGDLEEAEKVLKEWESSGNFYDVRIPNIVVVGYSKNGLH 342