BLASTX nr result
ID: Cnidium21_contig00028143
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00028143
(490 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN80285.1| hypothetical protein VITISV_026753 [Vitis vinifera] 177 8e-49
emb|CAN73765.1| hypothetical protein VITISV_035279 [Vitis vinifera] 172 5e-48
emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera] 172 9e-48
gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa] 175 2e-47
emb|CAN64613.1| hypothetical protein VITISV_030850 [Vitis vinifera] 174 7e-47
>emb|CAN80285.1| hypothetical protein VITISV_026753 [Vitis vinifera]
Length = 1387
Score = 177 bits (448), Expect(2) = 8e-49
Identities = 83/122 (68%), Positives = 97/122 (79%)
Frame = +2
Query: 125 LLSPAVNLDWPLHQFDVKNAFLHGDLKEDIYMDLPPGYQCSGTRKMVCKLRRSIYGLKQS 304
LLS A NLDWPLHQFDVKNAFLHGDL+EDIYMD+P GY + +VCKL+R++YGLKQS
Sbjct: 999 LLSLAANLDWPLHQFDVKNAFLHGDLEEDIYMDIPSGYVANTEGNIVCKLQRTLYGLKQS 1058
Query: 305 SRTCFGRFCKAMKSYGYSQSNADHTLFYKSSQGKISILIIYVDDMIITGDDQEEIQNLER 484
R FGRF MK YG+ QSN+DHTLF K QGK++ LI+YVDDMIITGDD EEI L+
Sbjct: 1059 PRAWFGRFSTXMKKYGFQQSNSDHTLFLKHRQGKLTALIVYVDDMIITGDDSEEIARLQE 1118
Query: 485 RL 490
+L
Sbjct: 1119 QL 1120
Score = 42.0 bits (97), Expect(2) = 8e-49
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 36 RIHSDVWNRVYGIDYQETFSPVAKLNTIRICCPL 137
R+ + + + Y +DYQETFSPVAKLNT+R+ L
Sbjct: 969 RLVAKGFTQTYXVDYQETFSPVAKLNTVRVLLSL 1002
>emb|CAN73765.1| hypothetical protein VITISV_035279 [Vitis vinifera]
Length = 2260
Score = 172 bits (436), Expect(2) = 5e-48
Identities = 81/122 (66%), Positives = 95/122 (77%)
Frame = +2
Query: 125 LLSPAVNLDWPLHQFDVKNAFLHGDLKEDIYMDLPPGYQCSGTRKMVCKLRRSIYGLKQS 304
LLS A NLDWPLHQFDVKNAFLHGDL+EDIYMD+P GY + +VCKL+R++YGLKQS
Sbjct: 867 LLSLAANLDWPLHQFDVKNAFLHGDLEEDIYMDIPSGYVANTEGNIVCKLQRTLYGLKQS 926
Query: 305 SRTCFGRFCKAMKSYGYSQSNADHTLFYKSSQGKISILIIYVDDMIITGDDQEEIQNLER 484
FGRF A K YG+ QSN+DHTLF K QGK++ LI+Y DDMIITGDD EEI L+
Sbjct: 927 PXAWFGRFSTAXKKYGFQQSNSDHTLFLKHRQGKLTALIVYXDDMIITGDDSEEIARLQE 986
Query: 485 RL 490
+L
Sbjct: 987 QL 988
Score = 43.9 bits (102), Expect(2) = 5e-48
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +3
Query: 36 RIHSDVWNRVYGIDYQETFSPVAKLNTIRICCPL 137
R+ + + + YG+DYQETFSPVAKLNT+R+ L
Sbjct: 837 RLVAKGFTQTYGVDYQETFSPVAKLNTMRVLLSL 870
Score = 142 bits (358), Expect(2) = 1e-38
Identities = 67/123 (54%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Frame = +2
Query: 125 LLSPAVNLDWPLHQFDVKNAFLHGDLKEDIYMDLPPGYQCSGTRKMVCKLRRSIYGLKQS 304
LLS A NLDW LHQ DVKNAFL+GDL+E++YMD+P G + + VC+LR+ +YGLKQS
Sbjct: 1842 LLSLAANLDWSLHQLDVKNAFLNGDLEEEVYMDIPAGLETTSNFNKVCRLRKFLYGLKQS 1901
Query: 305 SRTCFGRFCKAMKSYGYSQSNADHTLFYKS-SQGKISILIIYVDDMIITGDDQEEIQNLE 481
R F RF K +K YG+ Q ++HTLF K +GK++I+I+YVDD+I+TGD +E+I L+
Sbjct: 1902 PRAWFERFTKVVKGYGFVQCQSNHTLFVKHFPEGKLTIIIVYVDDIILTGDHEEKIDLLK 1961
Query: 482 RRL 490
+ L
Sbjct: 1962 KLL 1964
Score = 42.4 bits (98), Expect(2) = 1e-38
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +3
Query: 36 RIHSDVWNRVYGIDYQETFSPVAKLNTIRICCPL 137
R+ + + + YGIDYQETF PVAKLNT+R+ L
Sbjct: 1812 RLVAKGFTQSYGIDYQETFXPVAKLNTVRVLLSL 1845
>emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]
Length = 1409
Score = 172 bits (436), Expect(2) = 9e-48
Identities = 79/122 (64%), Positives = 98/122 (80%)
Frame = +2
Query: 125 LLSPAVNLDWPLHQFDVKNAFLHGDLKEDIYMDLPPGYQCSGTRKMVCKLRRSIYGLKQS 304
L+S A NLDWPLHQFDVKNAFLHGDL+E++YMD+PPG+ S K VCKL++++YGLKQS
Sbjct: 992 LISLAANLDWPLHQFDVKNAFLHGDLEEEVYMDIPPGFVSSTQGKEVCKLQKALYGLKQS 1051
Query: 305 SRTCFGRFCKAMKSYGYSQSNADHTLFYKSSQGKISILIIYVDDMIITGDDQEEIQNLER 484
R FGRF AM+ +G+ QSN DHTLF K +GK++ LIIYVDDMIITG+D+EEI L+
Sbjct: 1052 PRAWFGRFSLAMRKHGFKQSNXDHTLFLKHQRGKVTALIIYVDDMIITGNDEEEISKLQE 1111
Query: 485 RL 490
L
Sbjct: 1112 HL 1113
Score = 43.1 bits (100), Expect(2) = 9e-48
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 36 RIHSDVWNRVYGIDYQETFSPVAKLNTIRICCPL 137
R+ + + + YG+DYQETFSP AKLNT+R+ L
Sbjct: 962 RLVAKGYTQTYGVDYQETFSPXAKLNTVRVLISL 995
>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
Length = 1180
Score = 175 bits (443), Expect(2) = 2e-47
Identities = 85/129 (65%), Positives = 99/129 (76%)
Frame = +2
Query: 104 KIKYYSNLLSPAVNLDWPLHQFDVKNAFLHGDLKEDIYMDLPPGYQCSGTRKMVCKLRRS 283
KI LLS A NLDWPL QFDVKNAFLHGDL E++YMDLPPGY S ++VCKL++S
Sbjct: 756 KINTIRVLLSLAANLDWPLQQFDVKNAFLHGDLHEEVYMDLPPGYGTSTGEQVVCKLKKS 815
Query: 284 IYGLKQSSRTCFGRFCKAMKSYGYSQSNADHTLFYKSSQGKISILIIYVDDMIITGDDQE 463
+YGLKQS R FGRF K MK GY QSN+DHTLF K GK++ LIIYVDDM++TGDD E
Sbjct: 816 LYGLKQSPRAWFGRFTKFMKKIGYRQSNSDHTLFLKHRCGKVTALIIYVDDMVVTGDDIE 875
Query: 464 EIQNLERRL 490
EIQ L+ +L
Sbjct: 876 EIQRLQGQL 884
Score = 39.3 bits (90), Expect(2) = 2e-47
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 4 IERYKARLVAKGYTQTYGIECTE 72
++RYKARLVAKGYTQ YG++ E
Sbjct: 727 VDRYKARLVAKGYTQKYGVDYDE 749
>emb|CAN64613.1| hypothetical protein VITISV_030850 [Vitis vinifera]
Length = 598
Score = 174 bits (441), Expect(2) = 7e-47
Identities = 82/129 (63%), Positives = 99/129 (76%)
Frame = +2
Query: 104 KIKYYSNLLSPAVNLDWPLHQFDVKNAFLHGDLKEDIYMDLPPGYQCSGTRKMVCKLRRS 283
K+K LLS A NLDWPLHQ DVKNAFLHGDL+E+IYMD+PPGY + K+ C+L+R+
Sbjct: 209 KLKTVRVLLSLAANLDWPLHQLDVKNAFLHGDLEEEIYMDIPPGYTTTSEAKIACRLQRA 268
Query: 284 IYGLKQSSRTCFGRFCKAMKSYGYSQSNADHTLFYKSSQGKISILIIYVDDMIITGDDQE 463
+YGLKQS R FGR AM+ YG+ QSN+DHTLF K GKI+ LI+YVDDMIITGDD E
Sbjct: 269 LYGLKQSPRAWFGRLSSAMRKYGFQQSNSDHTLFLKHRLGKITALIVYVDDMIITGDDVE 328
Query: 464 EIQNLERRL 490
EI L+ +L
Sbjct: 329 EISKLQDQL 337
Score = 38.1 bits (87), Expect(2) = 7e-47
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 4 IERYKARLVAKGYTQTYGIECTE 72
I+RYKARLVAKGYTQ +GI+ E
Sbjct: 180 IDRYKARLVAKGYTQKHGIDYQE 202