BLASTX nr result

ID: Cnidium21_contig00028079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028079
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245...   226   5e-57
ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|2...   202   1e-49
ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|2...   199   6e-49
ref|XP_002519830.1| DNA binding protein, putative [Ricinus commu...   198   2e-48
ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263...   166   7e-39

>ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245362 [Vitis vinifera]
           gi|297742130|emb|CBI33917.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  226 bits (577), Expect = 5e-57
 Identities = 147/310 (47%), Positives = 169/310 (54%), Gaps = 12/310 (3%)
 Frame = +2

Query: 44  SAGMMQHDPNRFSYNSSDPKPLEAINSQYSDGST------GFSMEPARKKRGRPRKYSAD 205
           SA +MQ+  NRFS+ S      + ++S Y DGS+      GF++EPA+KKRGRPRKY+ D
Sbjct: 41  SAAIMQN--NRFSFTSMVAS--KPVDSPYGDGSSTGLRPCGFNIEPAKKKRGRPRKYAPD 96

Query: 206 GNIALGLSPVSAIAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLDALGTYG 385
           GNIALGL+P    + A                                   QLDALG  G
Sbjct: 97  GNIALGLAPTPIPSTAAHGDATGTPSSEPPAKRNRGRPPGSGKK-------QLDALGAAG 149

Query: 386 VGFTPHVITVNAGEDVAAKIMAFSQQGPRTVCILSANGAICNVTLRQPATSGGTVSYEGR 565
           VGFTPHVITVN GED+A+KIMAFSQQGPRTVCILSANGAICNVTLRQPA SGGT+SYEGR
Sbjct: 150 VGFTPHVITVNVGEDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSGGTISYEGR 209

Query: 566 FEII-XXXXXXXXXXXXXXXRTNVLSVSXXXXXXXXXXXXXXXXXXXXXXXQVIVGSFIA 742
           F+II                RT  LSVS                       QV+VGSFIA
Sbjct: 210 FDIISLSGSFLLSEDNGSRHRTGGLSVSLAGSDGRVLGGGVAGMLTAATPVQVVVGSFIA 269

Query: 743 DGKKP---KSGLSPAPPPHMLNFGAQVXXXXXXXXXXXXXXXXXXXXXLNQGPGSYSNAS 913
           DGKK    +SG S APP  MLNFGA V                     LN+GP  Y+N S
Sbjct: 270 DGKKTNTNQSGSSSAPPAQMLNFGAPVVPASPSQGGSSESSDENGGSPLNRGPLPYNNVS 329

Query: 914 QPM--PPMYA 937
           QP+   PMYA
Sbjct: 330 QPIHQMPMYA 339


>ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|222833839|gb|EEE72316.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  202 bits (513), Expect = 1e-49
 Identities = 131/272 (48%), Positives = 145/272 (53%), Gaps = 11/272 (4%)
 Frame = +2

Query: 149 FSMEPARKKRGRPRKYSADGNIALGLSPV---SAIAVAXXXXXXXXXXXXXXXXXXXXXX 319
           FS+EPA+KKRGRPRKY+ DGNIALGLSP    S ++                        
Sbjct: 3   FSIEPAKKKRGRPRKYTPDGNIALGLSPTPIHSGMSAGQADSSGGAGSGVMPDVASEHPS 62

Query: 320 XXXXXXXXXXXXXQLDALG-TYGVGFTPHVITVNAGEDVAAKIMAFSQQGPRTVCILSAN 496
                        QLDALG T GVGFTPHVITV AGED+A+KIMAFSQQGPRTVCILSAN
Sbjct: 63  KKHRGRPPGSGKKQLDALGGTGGVGFTPHVITVKAGEDIASKIMAFSQQGPRTVCILSAN 122

Query: 497 GAICNVTLRQPATSGGTVSYEGRFEII-XXXXXXXXXXXXXXXRTNVLSVSXXXXXXXXX 673
           GAICNVTLRQPA SGG+V+YEGRFEII                RT  LSVS         
Sbjct: 123 GAICNVTLRQPAMSGGSVTYEGRFEIISLSGSFLLSESNGSRSRTGGLSVSLAGSDGRVL 182

Query: 674 XXXXXXXXXXXXXXQVIVGSFIADGKKP-----KSGLSPAPPPHMLNFGAQV-XXXXXXX 835
                         QVI+GSFIADGKK      KSG S  PPP MLNFGA +        
Sbjct: 183 GGGVAGMLTAASAVQVILGSFIADGKKSNSKSLKSGPSSTPPPQMLNFGAPLTTASPPSR 242

Query: 836 XXXXXXXXXXXXXXLNQGPGSYSNASQPMPPM 931
                         +N+ PG Y N SQP+  M
Sbjct: 243 GGSSESSDENGGSPVNRTPGIYGNPSQPIHNM 274


>ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|222870276|gb|EEF07407.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score =  199 bits (507), Expect = 6e-49
 Identities = 134/297 (45%), Positives = 150/297 (50%), Gaps = 10/297 (3%)
 Frame = +2

Query: 71  NRFSYNSSDPKPLEAINSQYSDGSTG--FSMEPARKKRGRPRKYSADGNIALGLSPVSAI 244
           N  S N    KP  A +      S+G  FS+EPA+KKRGRPRKY+ DGNIALGLSP    
Sbjct: 67  NTMSGNRLQSKPEGAFDGSSPTSSSGMRFSIEPAKKKRGRPRKYTPDGNIALGLSPTPVP 126

Query: 245 AVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLDALGTYG-VGFTPHVITVNA 421
           +                                     QLDALG  G VGFTPHVITV A
Sbjct: 127 SGISAGHADSGGGGVTHDAASEHPSKKNRGRPPGSGKKQLDALGGVGGVGFTPHVITVKA 186

Query: 422 GEDVAAKIMAFSQQGPRTVCILSANGAICNVTLRQPATSGGTVSYEGRFEII-XXXXXXX 598
           GED+A+KIMAFSQQGPRTVCILSANGAICNVTLRQPA SGG+V+YEGRFEII        
Sbjct: 187 GEDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSGGSVTYEGRFEIISLSGSFLL 246

Query: 599 XXXXXXXXRTNVLSVSXXXXXXXXXXXXXXXXXXXXXXXQVIVGSFIADGKK-----PKS 763
                   R+  LSVS                       QVIVGSFIADGKK      KS
Sbjct: 247 SESNGSRSRSGGLSVSLAGSDGRVLGGGVAGMLTAASPVQVIVGSFIADGKKSNSSASKS 306

Query: 764 GLSPAPPPHMLNFGAQV-XXXXXXXXXXXXXXXXXXXXXLNQGPGSYSNASQPMPPM 931
           G S  PPP MLNF A +                      +N+ PG Y N +Q +  M
Sbjct: 307 GPSSTPPPQMLNFSAPLTTASPPSQGGSSDSSDENGGSPVNRNPGIYGNPNQSIHNM 363


>ref|XP_002519830.1| DNA binding protein, putative [Ricinus communis]
           gi|223540876|gb|EEF42434.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 376

 Score =  198 bits (503), Expect = 2e-48
 Identities = 141/315 (44%), Positives = 159/315 (50%), Gaps = 27/315 (8%)
 Frame = +2

Query: 68  PNRFSYNSSDPKPLEAINSQYSDG----------STG--FSMEPARKKRGRPRKYSADGN 211
           P+ F +NS  P   +      SDG          S+G  FSM+PA+KKRGRPRKY+ DGN
Sbjct: 49  PSGFPFNSVGPPRTQPSKQPSSDGGLFDGSSPPSSSGMRFSMDPAKKKRGRPRKYTPDGN 108

Query: 212 IALGLSP--VSAIAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----QLDA 370
           IALGLSP  +S+ A +                                        QLDA
Sbjct: 109 IALGLSPTPISSSATSLPPHVADSGSGVGVGIGTPAIASDPPSKRNRGRPPGSGKKQLDA 168

Query: 371 LGTYG-VGFTPHVITVNAGEDVAAKIMAFSQQGPRTVCILSANGAICNVTLRQPATSGGT 547
           LG  G VGFTPHVITV AGED+A+KIMAFSQQGPRTVCILSANGAICNVTLRQPA SGGT
Sbjct: 169 LGGVGGVGFTPHVITVKAGEDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSGGT 228

Query: 548 VSYEGRFEII-XXXXXXXXXXXXXXXRTNVLSVSXXXXXXXXXXXXXXXXXXXXXXXQVI 724
           V+YEGR+EII                R+  LSVS                       QVI
Sbjct: 229 VTYEGRYEIISLSGSFLLSENNGNRSRSGGLSVSLAGSDGRVLGGGVAGMLMAASPVQVI 288

Query: 725 VGSFIADGKKP-----KSGLSPAPPPHMLNFGA-QVXXXXXXXXXXXXXXXXXXXXXLNQ 886
           VGSFIADGKK      KSG S AP   MLNFGA                        LN+
Sbjct: 289 VGSFIADGKKSNSNIHKSGPSSAPTSQMLNFGAPMTTSSPPSQGVSSESSDENGSSPLNR 348

Query: 887 GPGSYSNASQPMPPM 931
            P  YSNA+QP+  M
Sbjct: 349 DPPIYSNATQPLHNM 363


>ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263332 [Vitis vinifera]
           gi|297745600|emb|CBI40765.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  166 bits (420), Expect = 7e-39
 Identities = 105/245 (42%), Positives = 124/245 (50%), Gaps = 13/245 (5%)
 Frame = +2

Query: 89  SSDPKPLEAINSQYSDGSTGFSM-----------EPARKKRGRPRKYSADGNIALGLSPV 235
           S    P ++      DGSTG ++           EP ++KRGRPRKY  DG +AL LSP 
Sbjct: 49  SGTSPPYQSSGGTGGDGSTGGAIIPHGLNMNMGSEPLKRKRGRPRKYGPDGTMALALSPA 108

Query: 236 -SAIAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLDALGTYGVGFTPHVIT 412
            S + V+                                   Q++ALG+ GVGFTPHVIT
Sbjct: 109 PSGVNVSQSGGAFSSPPASAGSASPSSLKKARGRPPGSSKKQQMEALGSAGVGFTPHVIT 168

Query: 413 VNAGEDVAAKIMAFSQQGPRTVCILSANGAICNVTLRQPATSGGTVSYEGRFEII-XXXX 589
           V AGEDV++KIM+FSQ GPR VCILSANGAI NVTLRQPATSGGTV+YEGRFEI+     
Sbjct: 169 VKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSGS 228

Query: 590 XXXXXXXXXXXRTNVLSVSXXXXXXXXXXXXXXXXXXXXXXXQVIVGSFIADGKKPKSGL 769
                      RT  LSVS                       QV+VGSFIADG+K     
Sbjct: 229 FLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKESKSA 288

Query: 770 SPAPP 784
           S   P
Sbjct: 289 SQVEP 293


Top