BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00028029
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM65680.1| unknown [Arabidopsis thaliana]                         117   3e-24
gb|AAL91165.1| unknown protein [Arabidopsis thaliana] gi|2489967...   117   4e-24
ref|NP_565366.1| SWIB/MDM2 domain-containing protein [Arabidopsi...   117   4e-24
ref|XP_002885945.1| SWIB complex BAF60b domain-containing protei...   115   9e-24
ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arab...   113   6e-23

>gb|AAM65680.1| unknown [Arabidopsis thaliana]
          Length = 141

 Score =  117 bits (293), Expect = 3e-24
 Identities = 65/101 (64%), Positives = 74/101 (73%), Gaps = 7/101 (6%)
 Frame = -3

Query: 284 ASH-ANMDGIVAAVMSGPE------TKKRVLRGITKPRPVSSEMQALVRVPEIARTQAIK 126
           ASH A    +V AV S  E      T KRV RGI KPRPVS EMQ +V +PEIARTQA+K
Sbjct: 32  ASHPAAKHCLVRAVTSATESSEPTATNKRVPRGIMKPRPVSPEMQDIVELPEIARTQALK 91

Query: 125 FIWTYIKENNLQDPGNKKIIICDEKLKKIFNGNERVGFLEI 3
            IW YIKE++LQDP NK+ I+CDEKLKKIF G +RVGFLEI
Sbjct: 92  RIWAYIKEHDLQDPQNKREILCDEKLKKIFEGRDRVGFLEI 132


>gb|AAL91165.1| unknown protein [Arabidopsis thaliana] gi|24899679|gb|AAN65054.1|
           unknown protein [Arabidopsis thaliana]
          Length = 141

 Score =  117 bits (292), Expect = 4e-24
 Identities = 61/92 (66%), Positives = 70/92 (76%), Gaps = 6/92 (6%)
 Frame = -3

Query: 260 IVAAVMSGPE------TKKRVLRGITKPRPVSSEMQALVRVPEIARTQAIKFIWTYIKEN 99
           +V AV S  E      T KRV RGI KPRPVS EMQ +V +PEIARTQA+K IW YIKE+
Sbjct: 41  LVRAVTSATESSEPTATNKRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEH 100

Query: 98  NLQDPGNKKIIICDEKLKKIFNGNERVGFLEI 3
           +LQDP NK+ I+CDEKLKKIF G +RVGFLEI
Sbjct: 101 DLQDPQNKREILCDEKLKKIFEGRDRVGFLEI 132


>ref|NP_565366.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
           gi|13926219|gb|AAK49586.1|AF370580_1 Unknown protein
           [Arabidopsis thaliana] gi|3650030|gb|AAC61285.1|
           expressed protein [Arabidopsis thaliana]
           gi|330251251|gb|AEC06345.1| SWIB/MDM2 domain-containing
           protein [Arabidopsis thaliana]
          Length = 141

 Score =  117 bits (292), Expect = 4e-24
 Identities = 61/92 (66%), Positives = 70/92 (76%), Gaps = 6/92 (6%)
 Frame = -3

Query: 260 IVAAVMSGPE------TKKRVLRGITKPRPVSSEMQALVRVPEIARTQAIKFIWTYIKEN 99
           +V AV S  E      T KRV RGI KPRPVS EMQ +V +PEIARTQA+K IW YIKE+
Sbjct: 41  LVRAVTSATESSEPTATNKRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEH 100

Query: 98  NLQDPGNKKIIICDEKLKKIFNGNERVGFLEI 3
           +LQDP NK+ I+CDEKLKKIF G +RVGFLEI
Sbjct: 101 DLQDPQNKREILCDEKLKKIFEGRDRVGFLEI 132


>ref|XP_002885945.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331785|gb|EFH62204.1| SWIB complex
           BAF60b domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 141

 Score =  115 bits (289), Expect = 9e-24
 Identities = 56/76 (73%), Positives = 64/76 (84%)
 Frame = -3

Query: 230 TKKRVLRGITKPRPVSSEMQALVRVPEIARTQAIKFIWTYIKENNLQDPGNKKIIICDEK 51
           T KRV RGI KPRPVS EMQ +V +PEIARTQA+K IW YIKE++LQDP NK+ I+CDEK
Sbjct: 57  TNKRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQDPQNKREILCDEK 116

Query: 50  LKKIFNGNERVGFLEI 3
           LKKIF G +RVGFLEI
Sbjct: 117 LKKIFEGRDRVGFLEI 132


>ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp.
           lyrata] gi|297314994|gb|EFH45417.1| hypothetical protein
           ARALYDRAFT_491238 [Arabidopsis lyrata subsp. lyrata]
          Length = 144

 Score =  113 bits (282), Expect = 6e-23
 Identities = 57/76 (75%), Positives = 62/76 (81%)
 Frame = -3

Query: 230 TKKRVLRGITKPRPVSSEMQALVRVPEIARTQAIKFIWTYIKENNLQDPGNKKIIICDEK 51
           TK R  RGI KPRPVS EMQ +V VPEI RTQA+K IW YIKE++LQDP NK+ IICDEK
Sbjct: 60  TKTREPRGIMKPRPVSPEMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDIICDEK 119

Query: 50  LKKIFNGNERVGFLEI 3
           LKKIF G ERVGFLEI
Sbjct: 120 LKKIFEGKERVGFLEI 135