BLASTX nr result

ID: Cnidium21_contig00027974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027974
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873250.1| hypothetical protein ARALYDRAFT_908558 [Arab...   128   6e-28
ref|XP_002884856.1| predicted protein [Arabidopsis lyrata subsp....   126   2e-27
ref|NP_566396.1| NDR1/HIN1-Like protein 1 [Arabidopsis thaliana]...   125   4e-27
gb|ABY88583.1| NHL1, partial [Arabidopsis thaliana]                   125   4e-27
gb|ABY88581.1| NHL1, partial [Arabidopsis thaliana]                   125   4e-27

>ref|XP_002873250.1| hypothetical protein ARALYDRAFT_908558 [Arabidopsis lyrata subsp.
           lyrata] gi|297319087|gb|EFH49509.1| hypothetical protein
           ARALYDRAFT_908558 [Arabidopsis lyrata subsp. lyrata]
          Length = 215

 Score =  128 bits (321), Expect = 6e-28
 Identities = 58/85 (68%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   LLIFLITWAILQPKKPRFIVRDATIYNFKIASSP-DLFTSNFQITVSSRNPNDNIGIYYD 179
           LL+ L+ WAILQP KPRFI++DAT++NF ++ +P +L TSNFQ+T+SSRNPND IGIYYD
Sbjct: 36  LLVILLVWAILQPSKPRFILQDATVFNFNVSGNPPNLLTSNFQMTLSSRNPNDKIGIYYD 95

Query: 180 KLDVYASYRGQQITYYTDIPPTYQG 254
           +LDVYASYR QQIT+ T +P TYQG
Sbjct: 96  RLDVYASYRSQQITFPTSMPTTYQG 120


>ref|XP_002884856.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330696|gb|EFH61115.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 202

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/84 (67%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
 Frame = +3

Query: 6   LIFLITWAILQPKKPRFIVRDATIYNFKIASSP-DLFTSNFQITVSSRNPNDNIGIYYDK 182
           L  L+ WAILQP KPRF+++DAT+Y F ++ +P +L TSNFQIT+SSRNPND IG+YYD+
Sbjct: 24  LTILLIWAILQPSKPRFLLQDATVYAFNVSGNPPNLITSNFQITLSSRNPNDKIGVYYDR 83

Query: 183 LDVYASYRGQQITYYTDIPPTYQG 254
           LDVYA+YR QQIT+ T IPPTYQG
Sbjct: 84  LDVYATYRSQQITFRTSIPPTYQG 107


>ref|NP_566396.1| NDR1/HIN1-Like protein 1 [Arabidopsis thaliana]
           gi|6041819|gb|AAF02134.1|AC009918_6 unknown protein
           [Arabidopsis thaliana]
           gi|9502172|gb|AAF88021.1|AF264697_1 NDR1/HIN1-Like
           protein 1 [Arabidopsis thaliana]
           gi|21595601|gb|AAM66116.1| harpin-induced protein-like
           [Arabidopsis thaliana] gi|56381911|gb|AAV85674.1|
           At3g11660 [Arabidopsis thaliana]
           gi|58331799|gb|AAW70397.1| At3g11660 [Arabidopsis
           thaliana] gi|332641559|gb|AEE75080.1| NDR1/HIN1-Like
           protein 1 [Arabidopsis thaliana]
          Length = 209

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/84 (69%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
 Frame = +3

Query: 6   LIFLITWAILQPKKPRFIVRDATIYNFKIASSP-DLFTSNFQITVSSRNPNDNIGIYYDK 182
           L  L+ WAILQP KPRFI++DAT+Y F ++ +P +L TSNFQIT+SSRNPN+ IGIYYD+
Sbjct: 31  LTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQITLSSRNPNNKIGIYYDR 90

Query: 183 LDVYASYRGQQITYYTDIPPTYQG 254
           LDVYA+YR QQIT+ T IPPTYQG
Sbjct: 91  LDVYATYRSQQITFPTSIPPTYQG 114


>gb|ABY88583.1| NHL1, partial [Arabidopsis thaliana]
          Length = 181

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/84 (69%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
 Frame = +3

Query: 6   LIFLITWAILQPKKPRFIVRDATIYNFKIASSP-DLFTSNFQITVSSRNPNDNIGIYYDK 182
           L  L+ WAILQP KPRFI++DAT+Y F ++ +P +L TSNFQIT+SSRNPN+ IGIYYD+
Sbjct: 24  LTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQITLSSRNPNNKIGIYYDR 83

Query: 183 LDVYASYRGQQITYYTDIPPTYQG 254
           LDVYA+YR QQIT+ T IPPTYQG
Sbjct: 84  LDVYATYRSQQITFPTSIPPTYQG 107


>gb|ABY88581.1| NHL1, partial [Arabidopsis thaliana]
          Length = 181

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/84 (69%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
 Frame = +3

Query: 6   LIFLITWAILQPKKPRFIVRDATIYNFKIASSP-DLFTSNFQITVSSRNPNDNIGIYYDK 182
           L  L+ WAILQP KPRFI++DAT+Y F ++ +P +L TSNFQIT+SSRNPN+ IGIYYD+
Sbjct: 24  LTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQITLSSRNPNNKIGIYYDR 83

Query: 183 LDVYASYRGQQITYYTDIPPTYQG 254
           LDVYA+YR QQIT+ T IPPTYQG
Sbjct: 84  LDVYATYRSQQITFPTSIPPTYQG 107


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