BLASTX nr result
ID: Cnidium21_contig00027965
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00027965
(606 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2... 103 2e-39
ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc... 97 2e-38
ref|NP_174954.1| General transcription factor 2-related zinc fin... 102 2e-37
ref|XP_002451298.1| hypothetical protein SORBIDRAFT_05g027190 [S... 98 5e-35
ref|NP_001172871.1| Os02g0234000 [Oryza sativa Japonica Group] g... 92 6e-35
>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
predicted protein [Populus trichocarpa]
Length = 788
Score = 103 bits (257), Expect(2) = 2e-39
Identities = 51/109 (46%), Positives = 74/109 (67%)
Frame = -3
Query: 334 FCHKHNVDVVDMSQLFVDPRKKLRMAEDLTNDHHYRIDKFIAILDRQIRELDDRLGEIGT 155
FC KH++D+++M + + R ++ +TN HH+R + F I+D Q+ ELDDR E T
Sbjct: 570 FCIKHDIDILNMDDEYKLRGRSRRKSQGITNLHHFRYELFNNIIDMQLTELDDRFTETST 629
Query: 154 ELLLSMSSLDPKDSFEAFDQEKLIRFAKFYPTEFSEVNIMELEWSLCTY 8
ELLL ++ L+P DSF AF++EKL+R A FYP+EFS V++M L L TY
Sbjct: 630 ELLLCVACLNPSDSFSAFNKEKLLRLALFYPSEFSIVDLMILGDQLDTY 678
Score = 84.7 bits (208), Expect(2) = 2e-39
Identities = 43/87 (49%), Positives = 60/87 (68%)
Frame = -2
Query: 602 NVLEHVAEHTDDHKLRGNAELMLVSMNNFDFVFYLHLLKNILGVSNELSRALQRNDQDIV 423
+VLE + E + + R A ++ M +F+FVF LH L+ IL V+NE S+ALQR DQDI
Sbjct: 480 DVLEIIREDGMNSEQRTEAVILTDIMESFNFVFMLHCLRRILAVTNEFSQALQRKDQDIE 539
Query: 422 NAMNLVNATRRLFKKMKENGWETLLGE 342
NAM+L+N ++ FK M+EN WE+LL E
Sbjct: 540 NAMSLLNTSKERFKMMRENDWESLLEE 566
>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
[Medicago truncatula]
Length = 892
Score = 96.7 bits (239), Expect(2) = 2e-38
Identities = 47/112 (41%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
Frame = -3
Query: 340 VLFCHKHNVDVVDMSQLFVDPRKKLR-MAEDLTNDHHYRIDKFIAILDRQIRELDDRLGE 164
+LFC+KH++++ M +F + K AE +T +HYRI+ F ++D Q++EL++R E
Sbjct: 671 ILFCNKHDINIPSMDDIFFRGKSKRGGNAESITIGNHYRIELFYTVVDMQLQELNNRFNE 730
Query: 163 IGTELLLSMSSLDPKDSFEAFDQEKLIRFAKFYPTEFSEVNIMELEWSLCTY 8
+ LL+ M L P +SF FD+ KLI FAKFYP EFS +++ L+ L TY
Sbjct: 731 TNSRLLICMECLCPNNSFSKFDKAKLIEFAKFYPIEFSPTSLVLLDSQLETY 782
Score = 88.6 bits (218), Expect(2) = 2e-38
Identities = 44/87 (50%), Positives = 60/87 (68%)
Frame = -2
Query: 602 NVLEHVAEHTDDHKLRGNAELMLVSMNNFDFVFYLHLLKNILGVSNELSRALQRNDQDIV 423
+VLE + + RG A+ +L+ MN FDF LHL+K +L SNELS+ALQR DQDIV
Sbjct: 583 DVLEMLRDDVSIKDGRGEAKGLLILMNTFDFALTLHLMKKVLDFSNELSQALQRKDQDIV 642
Query: 422 NAMNLVNATRRLFKKMKENGWETLLGE 342
NAMNLV+ T+ + ++++GWE LL E
Sbjct: 643 NAMNLVSITKERLQALRDDGWEPLLEE 669
>ref|NP_174954.1| General transcription factor 2-related zinc finger protein
[Arabidopsis thaliana] gi|332193792|gb|AEE31913.1|
General transcription factor 2-related zinc finger
protein [Arabidopsis thaliana]
Length = 496
Score = 102 bits (255), Expect(2) = 2e-37
Identities = 50/111 (45%), Positives = 73/111 (65%)
Frame = -3
Query: 334 FCHKHNVDVVDMSQLFVDPRKKLRMAEDLTNDHHYRIDKFIAILDRQIRELDDRLGEIGT 155
FC KH++++V M FV+PR R ++TN HHY+++ F ILD QI+E +DR E+ T
Sbjct: 377 FCKKHDIELVIMDGEFVNPRNP-RKRSNMTNFHHYQVECFYTILDMQIQEFNDRFDEVNT 435
Query: 154 ELLLSMSSLDPKDSFEAFDQEKLIRFAKFYPTEFSEVNIMELEWSLCTYFE 2
ELL ++SL P DSF FDQ K++R ++FYP +F+ V+ LE L Y +
Sbjct: 436 ELLSCVASLSPIDSFHEFDQLKVLRLSEFYPQDFTHVDRRSLEHQLGLYID 486
Score = 79.0 bits (193), Expect(2) = 2e-37
Identities = 39/88 (44%), Positives = 58/88 (65%)
Frame = -2
Query: 599 VLEHVAEHTDDHKLRGNAELMLVSMNNFDFVFYLHLLKNILGVSNELSRALQRNDQDIVN 420
+LE V E D R A +L N FDF FYL L+ +LG++N LS ALQ+ DQDI+N
Sbjct: 288 LLEFVEEEGTDSTKRRQANGLLKYFNTFDFAFYLQLMLLLLGLTNSLSVALQKKDQDILN 347
Query: 419 AMNLVNATRRLFKKMKENGWETLLGEGF 336
M+LV +T++ K++++GW++L+ E F
Sbjct: 348 PMSLVKSTKQQLCKLRDDGWDSLVNEVF 375
>ref|XP_002451298.1| hypothetical protein SORBIDRAFT_05g027190 [Sorghum bicolor]
gi|241937141|gb|EES10286.1| hypothetical protein
SORBIDRAFT_05g027190 [Sorghum bicolor]
Length = 780
Score = 98.2 bits (243), Expect(2) = 5e-35
Identities = 44/109 (40%), Positives = 66/109 (60%)
Frame = -3
Query: 334 FCHKHNVDVVDMSQLFVDPRKKLRMAEDLTNDHHYRIDKFIAILDRQIRELDDRLGEIGT 155
FC+KH +D ++M ++DPR+ R +T HHY +D F ++D ++ELD R E +
Sbjct: 561 FCNKHEIDQMEMEDTYIDPRQP-RKKTGITYKHHYEVDCFNDVIDWLVQELDSRFSETSS 619
Query: 154 ELLLSMSSLDPKDSFEAFDQEKLIRFAKFYPTEFSEVNIMELEWSLCTY 8
+LL+ ++ DP+D F AFD E L+ AK YP +FS + EL LC Y
Sbjct: 620 QLLVCSAAFDPRDQFHAFDVETLMSLAKLYPDDFSSDELRELSHDLCLY 668
Score = 75.5 bits (184), Expect(2) = 5e-35
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = -2
Query: 599 VLEHVAEHTDDHKLRGNAELMLVSMNNFDFVFYLHLLKNILGVSNELSRALQRNDQDIVN 420
VL+ V + D K R A +LV +FDF FYLHL+ L +N LS ALQR DQDIVN
Sbjct: 472 VLKAVEKDERDWKNRDQASNLLVYFKSFDFAFYLHLMLTTLTATNVLSLALQRKDQDIVN 531
Query: 419 AMNLVNATRRLFKKMKENGWETLLGE 342
A+ V +TR ++ +GW+ LL E
Sbjct: 532 AIGCVKSTRLHLNNLRRDGWDKLLDE 557
>ref|NP_001172871.1| Os02g0234000 [Oryza sativa Japonica Group]
gi|255670746|dbj|BAH91600.1| Os02g0234000 [Oryza sativa
Japonica Group]
Length = 949
Score = 92.0 bits (227), Expect(2) = 6e-35
Identities = 41/109 (37%), Positives = 68/109 (62%)
Frame = -3
Query: 334 FCHKHNVDVVDMSQLFVDPRKKLRMAEDLTNDHHYRIDKFIAILDRQIRELDDRLGEIGT 155
FC K+++ ++M + +V+P+K+ R +TN HHY +D F ++D ++ELD R E +
Sbjct: 546 FCDKYDIIKLEMGEAYVNPKKQ-RQKTGITNQHHYEVDCFNDVIDWLLQELDSRFNETSS 604
Query: 154 ELLLSMSSLDPKDSFEAFDQEKLIRFAKFYPTEFSEVNIMELEWSLCTY 8
ELLL ++ P++SF F+ E L+R AK YP +F+ + +L LC Y
Sbjct: 605 ELLLCSAAFSPRESFHDFNVENLMRLAKLYPNDFNSGELRDLRHHLCLY 653
Score = 81.3 bits (199), Expect(2) = 6e-35
Identities = 42/86 (48%), Positives = 55/86 (63%)
Frame = -2
Query: 599 VLEHVAEHTDDHKLRGNAELMLVSMNNFDFVFYLHLLKNILGVSNELSRALQRNDQDIVN 420
VLE V + D R A +LV +F+FVFYLHL+ IL ++N LS ALQR DQDIVN
Sbjct: 457 VLEFVEKDDKDRTNRDQANGLLVYFQSFEFVFYLHLMSTILIITNTLSLALQRKDQDIVN 516
Query: 419 AMNLVNATRRLFKKMKENGWETLLGE 342
A+ V +TR ++ +GWE LLG+
Sbjct: 517 AVKCVKSTRCHLDDLRRDGWENLLGD 542