BLASTX nr result

ID: Cnidium21_contig00027949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027949
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304369.1| nbs-lrr resistance protein [Populus trichoca...    52   5e-13
ref|XP_002867958.1| mob1/phocein family protein [Arabidopsis lyr...    49   4e-09
ref|XP_002870002.1| predicted protein [Arabidopsis lyrata subsp....    47   8e-09
emb|CAA16762.1| putative protein [Arabidopsis thaliana] gi|72687...    47   1e-08
ref|NP_193640.4| NB-ARC domain-containing disease resistance pro...    47   1e-08

>ref|XP_002304369.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222841801|gb|EEE79348.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1265

 Score = 52.0 bits (123), Expect(3) = 5e-13
 Identities = 28/66 (42%), Positives = 41/66 (62%)
 Frame = -2

Query: 517 LRILAFFNSTIRSAYSLLSGMKCLSVRIFRGYDIMDDVKEILDLENLTVLEISGPSYEEI 338
           L +LA F+  ++   S LS +K L V + RG D++D++  I  L+ LTVLEISG S    
Sbjct: 405 LEVLAVFDLKLKQLPSSLSQLKYLHVLVLRGCDLLDNIDHISKLKKLTVLEISGASSLTK 464

Query: 337 LPDNFF 320
           + D+FF
Sbjct: 465 ISDDFF 470



 Score = 45.4 bits (106), Expect(3) = 5e-13
 Identities = 20/43 (46%), Positives = 30/43 (69%)
 Frame = -3

Query: 324 FFEKMPNLQILNLSELHIKSLPTSLYIFLKLNWLILRRCPKLE 196
           FF ++  LQ LNLS   ++ LP+++   ++L WLILRRC +LE
Sbjct: 469 FFAQLTQLQSLNLSGSQLQELPSTISKLIELRWLILRRCKRLE 511



 Score = 21.2 bits (43), Expect(3) = 5e-13
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 182 MQKLTKLIVLDLSDST 135
           + +L+KL V DLSD+T
Sbjct: 516 IHELSKLEVFDLSDAT 531


>ref|XP_002867958.1| mob1/phocein family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313794|gb|EFH44217.1| mob1/phocein family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1419

 Score = 48.9 bits (115), Expect(2) = 4e-09
 Identities = 25/68 (36%), Positives = 38/68 (55%)
 Frame = -2

Query: 523 QKLRILAFFNSTIRSAYSLLSGMKCLSVRIFRGYDIMDDVKEILDLENLTVLEISGPSYE 344
           Q L ++  F  T       LS +K L V + R  D++D++ ++  LE L VLE+SG S  
Sbjct: 471 QDLEVVVLFEPTFHELVQSLSKLKKLRVLVIRDCDLIDNIDKLTGLEGLHVLEVSGASSL 530

Query: 343 EILPDNFF 320
             +PD+FF
Sbjct: 531 VNIPDDFF 538



 Score = 37.0 bits (84), Expect(2) = 4e-09
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = -3

Query: 324 FFEKMPNLQILNLSELHIKSLPTSLYIFLKLNWLILRRCPKLE 196
           FF+ M  LQ +NLS L IKS P+++     L   ILR C +L+
Sbjct: 537 FFKNMTQLQSINLSGLAIKSSPSTIENLSMLRCFILRHCSELQ 579


>ref|XP_002870002.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315838|gb|EFH46261.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1070

 Score = 46.6 bits (109), Expect(2) = 8e-09
 Identities = 23/66 (34%), Positives = 37/66 (56%)
 Frame = -2

Query: 517 LRILAFFNSTIRSAYSLLSGMKCLSVRIFRGYDIMDDVKEILDLENLTVLEISGPSYEEI 338
           L +L  F+ T+      L  +K L V + R YD++  ++++ DL  L VLE+ G S  E 
Sbjct: 469 LEVLGLFSPTMGYLIRSLRELKKLRVLVIRNYDLLQSMEDLKDLRRLEVLEVFGASSVET 528

Query: 337 LPDNFF 320
           + D+FF
Sbjct: 529 ISDDFF 534



 Score = 38.1 bits (87), Expect(2) = 8e-09
 Identities = 23/43 (53%), Positives = 26/43 (60%)
 Frame = -3

Query: 324 FFEKMPNLQILNLSELHIKSLPTSLYIFLKLNWLILRRCPKLE 196
           FF  M  LQ LNLS L IKS P+S+     L+ LILR C  LE
Sbjct: 533 FFAAMSELQSLNLSGLRIKSSPSSISQLKYLHSLILRDCLVLE 575


>emb|CAA16762.1| putative protein [Arabidopsis thaliana] gi|7268700|emb|CAB78907.1|
           putative protein [Arabidopsis thaliana]
          Length = 1405

 Score = 46.6 bits (109), Expect(2) = 1e-08
 Identities = 24/68 (35%), Positives = 38/68 (55%)
 Frame = -2

Query: 523 QKLRILAFFNSTIRSAYSLLSGMKCLSVRIFRGYDIMDDVKEILDLENLTVLEISGPSYE 344
           Q L ++  F  T       LS +K L V + R  D++D++ ++  L+ L VLE+SG S  
Sbjct: 445 QDLEVVVLFEPTFHELVLSLSKLKKLRVLVIRDCDLIDNIDKLSGLQGLHVLEVSGASSL 504

Query: 343 EILPDNFF 320
             +PD+FF
Sbjct: 505 VNIPDDFF 512



 Score = 37.7 bits (86), Expect(2) = 1e-08
 Identities = 20/43 (46%), Positives = 26/43 (60%)
 Frame = -3

Query: 324 FFEKMPNLQILNLSELHIKSLPTSLYIFLKLNWLILRRCPKLE 196
           FF+ M  LQ LNLS L IKS P+++     L   ILR C +L+
Sbjct: 511 FFKNMTQLQSLNLSGLAIKSSPSTIEKLSMLRCFILRHCSELQ 553


>ref|NP_193640.4| NB-ARC domain-containing disease resistance protein [Arabidopsis
           thaliana] gi|334302784|sp|P0CB16.2|DRL25_ARATH RecName:
           Full=Putative disease resistance protein At4g19050
           gi|332658734|gb|AEE84134.1| NB-ARC domain-containing
           disease resistance protein [Arabidopsis thaliana]
          Length = 1201

 Score = 46.6 bits (109), Expect(2) = 1e-08
 Identities = 24/68 (35%), Positives = 38/68 (55%)
 Frame = -2

Query: 523 QKLRILAFFNSTIRSAYSLLSGMKCLSVRIFRGYDIMDDVKEILDLENLTVLEISGPSYE 344
           Q L ++  F  T       LS +K L V + R  D++D++ ++  L+ L VLE+SG S  
Sbjct: 445 QDLEVVVLFEPTFHELVLSLSKLKKLRVLVIRDCDLIDNIDKLSGLQGLHVLEVSGASSL 504

Query: 343 EILPDNFF 320
             +PD+FF
Sbjct: 505 VNIPDDFF 512



 Score = 37.7 bits (86), Expect(2) = 1e-08
 Identities = 20/43 (46%), Positives = 26/43 (60%)
 Frame = -3

Query: 324 FFEKMPNLQILNLSELHIKSLPTSLYIFLKLNWLILRRCPKLE 196
           FF+ M  LQ LNLS L IKS P+++     L   ILR C +L+
Sbjct: 511 FFKNMTQLQSLNLSGLAIKSSPSTIEKLSMLRCFILRHCSELQ 553


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