BLASTX nr result

ID: Cnidium21_contig00027948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027948
         (1691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277473.1| PREDICTED: pectinesterase 3 [Vitis vinifera]       63   6e-16
emb|CBI27756.3| unnamed protein product [Vitis vinifera]               63   6e-16
gb|AFQ23194.1| pectin methylesterase [Theobroma cacao]                 55   1e-11
gb|AAK84485.1| putative thermostable pectinesterase [Citrus sine...    56   2e-11
gb|AAK69696.1|AF355057_1 putative pectin methylesterase LuPME5 [...    52   7e-11

>ref|XP_002277473.1| PREDICTED: pectinesterase 3 [Vitis vinifera]
          Length = 582

 Score = 62.8 bits (151), Expect(2) = 6e-16
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +2

Query: 287 SSRQDTIYAHSLRRFFPECKIQATINFIFGNAAAIFHN 400
           SS QDT+YAHSLR+F+ EC IQ TI+FIFGNAAA+F N
Sbjct: 393 SSYQDTLYAHSLRQFYRECTIQGTIDFIFGNAAAVFQN 430



 Score = 49.3 bits (116), Expect(2) = 6e-16
 Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
 Frame = +1

Query: 169 LGVIGDRFLAR--TVVNASGPAKHYAISLKASLNAAFYHCEIIS 294
           L V+GD+FLAR  T++N +GP KH A++++ + N+AFY C   S
Sbjct: 351 LTVVGDKFLARDLTIINTAGPEKHQAVAVRVTSNSAFYRCNFSS 394


>emb|CBI27756.3| unnamed protein product [Vitis vinifera]
          Length = 537

 Score = 62.8 bits (151), Expect(2) = 6e-16
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +2

Query: 287 SSRQDTIYAHSLRRFFPECKIQATINFIFGNAAAIFHN 400
           SS QDT+YAHSLR+F+ EC IQ TI+FIFGNAAA+F N
Sbjct: 390 SSYQDTLYAHSLRQFYRECTIQGTIDFIFGNAAAVFQN 427



 Score = 49.3 bits (116), Expect(2) = 6e-16
 Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
 Frame = +1

Query: 169 LGVIGDRFLAR--TVVNASGPAKHYAISLKASLNAAFYHCEIIS 294
           L V+GD+FLAR  T++N +GP KH A++++ + N+AFY C   S
Sbjct: 348 LTVVGDKFLARDLTIINTAGPEKHQAVAVRVTSNSAFYRCNFSS 391


>gb|AFQ23194.1| pectin methylesterase [Theobroma cacao]
          Length = 582

 Score = 54.7 bits (130), Expect(2) = 1e-11
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = +2

Query: 296 QDTIYAHSLRRFFPECKIQATINFIFGNAAAIFHNFKVNGR 418
           QDT+YAHS R+F+  C I  T++FIFGNAAA+F N  ++ R
Sbjct: 398 QDTLYAHSNRQFYVNCIIAGTVDFIFGNAAAVFQNCDIHAR 438



 Score = 42.7 bits (99), Expect(2) = 1e-11
 Identities = 18/45 (40%), Positives = 34/45 (75%), Gaps = 3/45 (6%)
 Frame = +1

Query: 169 LGVIGDRFLARTVV--NASGPAKHYAISLKASLN-AAFYHCEIIS 294
           + V+G+RFLAR++   N +GP+KH A++L+   + +AFY C++++
Sbjct: 352 VAVVGERFLARSITFQNTAGPSKHQAVALRVGADLSAFYECDMLA 396


>gb|AAK84485.1| putative thermostable pectinesterase [Citrus sinensis]
           gi|24250751|gb|AAK84486.1| putative thermostable
           pectinesterase [Citrus sinensis]
          Length = 631

 Score = 56.2 bits (134), Expect(2) = 2e-11
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = +2

Query: 296 QDTIYAHSLRRFFPECKIQATINFIFGNAAAIFHNFKVNGR 418
           QDT+Y HSLR+F+  C I  T++FIFGNAAA+F N  ++ R
Sbjct: 447 QDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHAR 487



 Score = 40.4 bits (93), Expect(2) = 2e-11
 Identities = 18/45 (40%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
 Frame = +1

Query: 169 LGVIGDRFLARTVV--NASGPAKHYAISLKASLN-AAFYHCEIIS 294
           + V+GD FLAR +   N +GP+KH A++L+   + +AFY C++++
Sbjct: 401 VAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLA 445


>gb|AAK69696.1|AF355057_1 putative pectin methylesterase LuPME5 [Linum usitatissimum]
          Length = 553

 Score = 52.0 bits (123), Expect(2) = 7e-11
 Identities = 21/41 (51%), Positives = 29/41 (70%)
 Frame = +2

Query: 296 QDTIYAHSLRRFFPECKIQATINFIFGNAAAIFHNFKVNGR 418
           QDT+Y HSLR+F+  C I  T++FIFGNAA +  N  ++ R
Sbjct: 369 QDTLYVHSLRQFYVSCFIAGTVDFIFGNAAVVLQNCDIHAR 409



 Score = 42.7 bits (99), Expect(2) = 7e-11
 Identities = 19/45 (42%), Positives = 33/45 (73%), Gaps = 3/45 (6%)
 Frame = +1

Query: 169 LGVIGDRFLAR--TVVNASGPAKHYAISLKASLN-AAFYHCEIIS 294
           + V+GDRF+AR  T  N +GP+KH A++L+ + +  AFY C++++
Sbjct: 323 VAVVGDRFMARDLTFQNTAGPSKHQAVALRVNADFTAFYRCDMLA 367


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