BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00027925
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containi...   450   e-124
ref|XP_002525278.1| GTP binding protein, putative [Ricinus commu...   436   e-120
ref|XP_003608531.1| Pentatricopeptide repeat-containing protein ...   427   e-117
ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containi...   412   e-113
ref|NP_201558.3| delayed greening 1 protein [Arabidopsis thalian...   407   e-111

>ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Glycine max]
          Length = 865

 Score =  450 bits (1157), Expect = e-124
 Identities = 215/326 (65%), Positives = 262/326 (80%)
 Frame = +2

Query: 2    FNAILNACVASRQWKGVSWVIEEMRKGGLKPNGATFGLAMEVMLQSKKYDLVHEYFWKMK 181
            +NA+LNACV S+QWKGVSWV +++RK GLKPNGAT+GLAMEVML+S  YDLVHE+F KMK
Sbjct: 327  YNAVLNACVPSKQWKGVSWVFKQLRKSGLKPNGATYGLAMEVMLESGNYDLVHEFFGKMK 386

Query: 182  RSGEAIKALTYKVLVRAFREEGKVNEAVQAVREMEQRGLVGAALVYYELVCCLCTNGRWL 361
            RSGE  KALTYKVLV+ F +EGKVNEAV+AVR+ME+RG++G A VYYEL CCLC NGRW 
Sbjct: 387  RSGEVPKALTYKVLVKTFWKEGKVNEAVKAVRDMERRGVIGTASVYYELACCLCNNGRWQ 446

Query: 362  EAMEEIEKLKKLPRTKSLEVTFTGMILSAKDGGYIDHCICIFERSKEHCGPGIGIINAML 541
            +A+ E++ ++ LP  K LEVTFTGMI S+ DGG+I+ CICIFE  KEHC P IG IN ML
Sbjct: 447  DAILEVDNIRSLPHAKPLEVTFTGMIKSSMDGGHINDCICIFEYMKEHCVPNIGAINTML 506

Query: 542  KIYGQNDMFLEARELFEDIKRTAPGSDTFPSNHSSSLKPDTYTYSAMLEASAAALQWEYF 721
            K+YGQNDMF +A+ LFE++K         P    SS+ PD Y+Y++MLEASA A QWEYF
Sbjct: 507  KVYGQNDMFSKAKVLFEEVKVAKSEFYATPEGGYSSVVPDVYSYNSMLEASATAQQWEYF 566

Query: 722  ENVYKEMVLCGYQLDQNKHAHLLVKASRNGKCDVLEHAFDTILRAGEIPHLSFFTEMVCQ 901
            E+VY+EM++ GYQLDQ+KH  LLVKASR GK  +LEHAFD IL AGEIPH  FF E+V Q
Sbjct: 567  EHVYREMIVSGYQLDQDKHLSLLVKASRAGKLHLLEHAFDMILEAGEIPHHLFFFELVIQ 626

Query: 902  ASAQRDYERAVAIVNTLAYAPFQVSE 979
            A AQ +YERAV ++NT+AYAPF+V+E
Sbjct: 627  AIAQHNYERAVILINTMAYAPFRVTE 652


>ref|XP_002525278.1| GTP binding protein, putative [Ricinus communis]
            gi|223535436|gb|EEF37106.1| GTP binding protein, putative
            [Ricinus communis]
          Length = 1010

 Score =  436 bits (1121), Expect = e-120
 Identities = 216/326 (66%), Positives = 259/326 (79%)
 Frame = +2

Query: 2    FNAILNACVASRQWKGVSWVIEEMRKGGLKPNGATFGLAMEVMLQSKKYDLVHEYFWKMK 181
            +NA+LNACV ++QWKGV+WV E++RK GLKPNGAT+GLAMEVML S KYDLVHE F KM 
Sbjct: 474  YNAVLNACVPTQQWKGVAWVFEQLRKSGLKPNGATYGLAMEVMLNSGKYDLVHELFRKMN 533

Query: 182  RSGEAIKALTYKVLVRAFREEGKVNEAVQAVREMEQRGLVGAALVYYELVCCLCTNGRWL 361
            RSGEA KALTYKVLVRAF EEGKVNEA++AVR+ME RG+VG A +YYEL CCLC  G W 
Sbjct: 534  RSGEAPKALTYKVLVRAFWEEGKVNEAMEAVRDMENRGVVGTASLYYELACCLCYYGMWQ 593

Query: 362  EAMEEIEKLKKLPRTKSLEVTFTGMILSAKDGGYIDHCICIFERSKEHCGPGIGIINAML 541
            +AM E++K+K L  +K LEVTFTG+I+S+ DGG++  CI IFE  K +C P IG IN ML
Sbjct: 594  DAMLEVKKMKNLRHSKPLEVTFTGLIMSSLDGGHVSDCISIFEYMKAYCVPNIGTINIML 653

Query: 542  KIYGQNDMFLEARELFEDIKRTAPGSDTFPSNHSSSLKPDTYTYSAMLEASAAALQWEYF 721
            K+YG+ND+F +A+ELF +IK T        +N  + L PD +TYS+MLEASA+ALQWEYF
Sbjct: 654  KVYGRNDLFSKAKELFGEIKGT--------NNDGTYLVPDEFTYSSMLEASASALQWEYF 705

Query: 722  ENVYKEMVLCGYQLDQNKHAHLLVKASRNGKCDVLEHAFDTILRAGEIPHLSFFTEMVCQ 901
            E VYKEM  CGYQLDQ KHA LLV+ASR GK  +LEHAFD  L AGEIPH   FTEMV Q
Sbjct: 706  ELVYKEMTFCGYQLDQKKHASLLVEASRVGKYHLLEHAFDAALEAGEIPHHLLFTEMVFQ 765

Query: 902  ASAQRDYERAVAIVNTLAYAPFQVSE 979
            A+AQ++YERAV +VNTLA APF++SE
Sbjct: 766  ATAQQNYERAVVLVNTLALAPFKISE 791


>ref|XP_003608531.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355509586|gb|AES90728.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 877

 Score =  427 bits (1099), Expect = e-117
 Identities = 205/326 (62%), Positives = 254/326 (77%)
 Frame = +2

Query: 2    FNAILNACVASRQWKGVSWVIEEMRKGGLKPNGATFGLAMEVMLQSKKYDLVHEYFWKMK 181
            +NA+LNACV S+QWKGVSWV ++MRK  LKPNGAT+GLAMEVMLQS  YDLVHE F KM+
Sbjct: 349  YNAVLNACVPSKQWKGVSWVFQQMRKSSLKPNGATYGLAMEVMLQSGNYDLVHELFEKMQ 408

Query: 182  RSGEAIKALTYKVLVRAFREEGKVNEAVQAVREMEQRGLVGAALVYYELVCCLCTNGRWL 361
            R+GE  +ALTYKV+VR F +EGKV+EAV+AVR+ME+RG++G A VYYEL CCLC  GRW 
Sbjct: 409  RNGEVPEALTYKVMVRTFWKEGKVDEAVKAVRDMERRGVMGTASVYYELACCLCNCGRWQ 468

Query: 362  EAMEEIEKLKKLPRTKSLEVTFTGMILSAKDGGYIDHCICIFERSKEHCGPGIGIINAML 541
            +A  E+EK+K+LP  K LEVTFTGMI S+ DGG+ID CICIFE  ++HC P +G +N ML
Sbjct: 469  DATLEVEKIKRLPHAKPLEVTFTGMIRSSMDGGHIDDCICIFEYMQDHCAPNVGTVNTML 528

Query: 542  KIYGQNDMFLEARELFEDIKRTAPGSDTFPSNHSSSLKPDTYTYSAMLEASAAALQWEYF 721
            K+Y QNDMF  A+ LFE++K              S L+PD YTY+ MLEAS+   QWEYF
Sbjct: 529  KVYSQNDMFSTAKVLFEEVKVA-----------KSDLRPDAYTYNLMLEASSRGHQWEYF 577

Query: 722  ENVYKEMVLCGYQLDQNKHAHLLVKASRNGKCDVLEHAFDTILRAGEIPHLSFFTEMVCQ 901
            E+VYKEM+L GY LDQNKH  LLVKASR GK  +LEHAFD +L AGEIPH  FF E+V Q
Sbjct: 578  EHVYKEMILSGYHLDQNKHLPLLVKASRAGKLHLLEHAFDMVLEAGEIPHHLFFFELVIQ 637

Query: 902  ASAQRDYERAVAIVNTLAYAPFQVSE 979
            A AQ +YERA+ +++T+A+AP++V+E
Sbjct: 638  AIAQHNYERAIILLSTMAHAPYRVTE 663


>ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Cucumis sativus]
            gi|449499902|ref|XP_004160949.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Cucumis sativus]
          Length = 860

 Score =  412 bits (1060), Expect = e-113
 Identities = 200/329 (60%), Positives = 259/329 (78%), Gaps = 3/329 (0%)
 Frame = +2

Query: 2    FNAILNACVASRQWKGVSWVIEEMRKGGLKPNGATFGLAMEVMLQSKKYDLVHEYFWKMK 181
            +NAILNAC+ + +WKGV WV  ++RK GL+PNGAT+GL+MEVML+S KY+ +H  F KMK
Sbjct: 346  YNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMK 405

Query: 182  RSGEAIKALTYKVLVRAFREEGKVNEAVQAVREMEQRGLVGAALVYYELVCCLCTNGRWL 361
            ++G+ +KA TY+VLV+AF EEG VN A++AVR+MEQRG+VG+A VYYEL CCLC NG+W 
Sbjct: 406  KNGQTLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQ 465

Query: 362  EAMEEIEKLKKLPRTKSLEVTFTGMILSAKDGGYIDHCICIFERSKEHCGPGIGIINAML 541
            +A+ E+EK+K L   K L VTFTGMI S+ +GG+ID CI IFE  K+ C P IG IN ML
Sbjct: 466  DALVEVEKMKTLSHMKPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTML 525

Query: 542  KIYGQNDMFLEARELFEDIKRTAPGSDTFPSNHSS---SLKPDTYTYSAMLEASAAALQW 712
            K+YG+NDM+ +A++LFE+IKR A       S+H S   SL PD YTY++MLEA+A++LQW
Sbjct: 526  KVYGRNDMYSKAKDLFEEIKRKADS-----SSHDSAVPSLVPDEYTYASMLEAAASSLQW 580

Query: 713  EYFENVYKEMVLCGYQLDQNKHAHLLVKASRNGKCDVLEHAFDTILRAGEIPHLSFFTEM 892
            EYFE+VY+EM L GYQLDQ+KHA LLV+AS+ GK  +L+HAFDTIL AG+IPH   FTEM
Sbjct: 581  EYFESVYREMALSGYQLDQSKHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEM 640

Query: 893  VCQASAQRDYERAVAIVNTLAYAPFQVSE 979
            + Q + Q +YE+AV +V T+ YAPFQVSE
Sbjct: 641  ILQLTTQDNYEQAVTLVRTMGYAPFQVSE 669


>ref|NP_201558.3| delayed greening 1 protein [Arabidopsis thaliana]
            gi|223635752|sp|Q9FJW6.2|PP451_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g67570, chloroplastic; AltName: Full=Protein DELAYED
            GREENING 1; AltName: Full=Protein EMBRYO DEFECTIVE 1408;
            Flags: Precursor gi|332010978|gb|AED98361.1| delayed
            greening 1 protein [Arabidopsis thaliana]
          Length = 798

 Score =  407 bits (1045), Expect = e-111
 Identities = 192/326 (58%), Positives = 250/326 (76%)
 Frame = +2

Query: 2    FNAILNACVASRQWKGVSWVIEEMRKGGLKPNGATFGLAMEVMLQSKKYDLVHEYFWKMK 181
            +NAILNACV + QWK VSWV  E+RK GL+PNGAT+GLAMEVML+S K+D VH++F KMK
Sbjct: 344  YNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMK 403

Query: 182  RSGEAIKALTYKVLVRAFREEGKVNEAVQAVREMEQRGLVGAALVYYELVCCLCTNGRWL 361
             SGEA KA+TYKVLVRA   EGK+ EAV+AVR+MEQ+G++G   VYYEL CCLC NGRW 
Sbjct: 404  SSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWC 463

Query: 362  EAMEEIEKLKKLPRTKSLEVTFTGMILSAKDGGYIDHCICIFERSKEHCGPGIGIINAML 541
            +AM E+ ++K+L   + LE+TFTG+I ++ +GG++D C+ IF+  K+ C P IG  N ML
Sbjct: 464  DAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMML 523

Query: 542  KIYGQNDMFLEARELFEDIKRTAPGSDTFPSNHSSSLKPDTYTYSAMLEASAAALQWEYF 721
            K+YG+NDMF EA+ELFE+I           S   + L P+ YTYS MLEASA +LQWEYF
Sbjct: 524  KVYGRNDMFSEAKELFEEI----------VSRKETHLVPNEYTYSFMLEASARSLQWEYF 573

Query: 722  ENVYKEMVLCGYQLDQNKHAHLLVKASRNGKCDVLEHAFDTILRAGEIPHLSFFTEMVCQ 901
            E+VY+ MVL GYQ+DQ KHA +L++ASR GK  +LEHAFD +L  GEIPH  FFTE++C 
Sbjct: 574  EHVYQTMVLSGYQMDQTKHASMLIEASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCH 633

Query: 902  ASAQRDYERAVAIVNTLAYAPFQVSE 979
            A+A+ D++RA+ ++NT+A A FQ+SE
Sbjct: 634  ATAKGDFQRAITLINTVALASFQISE 659